Gene Clim_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1443 
Symbol 
ID6354756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1549957 
End bp1550751 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content57% 
IMG OID642669053 
Productfatty acid hydroxylase 
Protein accessionYP_001943481 
Protein GI189346952 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000016954 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA CACTCCTTTC CATACCCGAC CTTCGGACAC TCTCGTACGG CACCACCATT 
GCCGGAGGAA TACTGCTCTG GATCCTCGAA GGCCTCTTCC CTTTTTTCTC CGGGCAGAAG
CGCCGCGACC TCCATGCAAG GCTCAACCTG TCGATGGCCG GGCTCAACCT GCTGATCCTG
CTCCCTTCGG GCATACTCAT GGCATTCATG CTCGACTGGT CGAGAAACGT CTGGCCGGGA
ATCGGAATGC TGGTACTTCA CCCCGTTGCC GAAACAATCG CGATCATCCT CGGCATCGAC
CTGTGGATGT ACGTCTGGCA TCGTCTCAAC CATGAAACGG CATTTCTCTG GAGATTTCAC
TCGGTACACC ACAGCGACGC CACGCTCGAC GTCACCACCA GCTGGAGATT CCATTACATG
GAGATCCTGT TCTCGGAACT GCTTCGTCTT CCCCTCTTCA TGCTGATGGG CGCAGGTATC
GAACATCTGC TGCTCTACTC GCTCCTCATG ACGCCGGTCA TCGAATTCCA CCACAGCAAC
ATCTCCATCC CGCCAGCCCT TGACCGTCTG GCGCGGCTCG TTATCCCGAC CCCTGTGATG
CACCGCCTGC ACCATTCAAG AGAGAGAAGC GAACACGACT CCAACTACGG CAGCATGCTC
TCACTATGGG ACCGTCTTTT CGGCAGCTTC CTGTTGAAAG AGAGTCTCGA TGGCCTCCGT
CTCGGCCTCG ACCAGGAAAG CGACCCGGGC AAGCAAAGGC TCTCCGCCCT GCTCCGGAGA
CCTTTCCGTA CATAG
 
Protein sequence
MTETLLSIPD LRTLSYGTTI AGGILLWILE GLFPFFSGQK RRDLHARLNL SMAGLNLLIL 
LPSGILMAFM LDWSRNVWPG IGMLVLHPVA ETIAIILGID LWMYVWHRLN HETAFLWRFH
SVHHSDATLD VTTSWRFHYM EILFSELLRL PLFMLMGAGI EHLLLYSLLM TPVIEFHHSN
ISIPPALDRL ARLVIPTPVM HRLHHSRERS EHDSNYGSML SLWDRLFGSF LLKESLDGLR
LGLDQESDPG KQRLSALLRR PFRT