| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1433 |
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| Symbol | |
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| ID | 6356204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1541680 |
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| End bp | 1542801 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642669044 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001943472 |
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| Protein GI | 189346943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.195416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCTT TTGCGGCTTT TTTTGTGCCC CTGCTGGTGT TTGCCGGTTG CGGCGGCCAG
CAGTCGCCCG GCGGTCCGCA GGCCATGCCC CTGGCTGCGC TGAAGCTGAA GCCTGCAGCG
GCAGTCGTGA TGCAGGAGTT TCCCGCCAGG ATCGAAGGGA AGGTGAATGT TGAAATCCGG
TCGCAGGTGG ACGGTATTCT GGAGAAGATC TATGTGGACG AAGGCGCGCT GGTGAAGGCC
GGTCAGCCGC TTTTCCGCAT CGACAGCCGT CTCTACAGGG AACAGTACAA CCAGGCGCTT
GCCGCCCAGC ATGCTGCCGA AGCTGCCGCC TCCATCGCAA GGCTCGATGT CGACAAGCTT
GAGCCGCTGG TCAGGAACAA GGTCGTCTCC GATATTCAGC TTAAAAGCGC AAAGGCGTCG
CTGCTGGCGG CAAACGCCAA CGTGGAGCAG GCGAGAGCTT CGGCGCAGTC GGCCCGCATC
AATCTCGGCT ATGCGGTGAT CAGTGCACCG GTCGGCGGCT ATATCGGCAC CATCCCGTTC
CGCACGGGAA GCCTGATCGC TCGGAGCGGC TCAACGCCGC TTACCATGCT TTCTGACGTG
CGCGAGGTGT ACGGCTATTT CAGCATGAGC GAAGCGGATT TCATGCAGTT CCGGCGCCAG
TACGAGGGTG CGACGCTCGA AGAGAAAATC CGGAACGTTC CGCCGGTGAC GCTGCTGCTT
GCCGACGGAA GCTCTTATCC TGAAAAAGGC GAGCTTGAAA TGGTGGGCGG TCAGTTCGAC
GAGTCGACGG CGGCAATTGC CGTGAGGGCG GTGTTCCCCA ACGAAAACGG ACTGCTCCGG
ACGGGCAATA CCGGCCGGGT CCGGCTTGAA AGCCGTTTCG AAGGCGTGCT GCTGGTTCCG
CAGGCCGCGA CCGTCGAGAT GCAGGACAAG GTTTTCGTCT TCAGGCTCGA CAAATCGGGA
AAAGTCCGCC GCACGGCGTT CACGGTTAGC GGCAAAAGCG GCGACAGTTA CATTGCCGGT
GCGGAACTGA AGCCCGGCGA CGTGATTGTG ACCAGCGGTC TCGGCAGGCT GCAGGACGGT
ATGGCGGTGA AGCCGGTGTT CGACAAGGCG TCTCAGAAAT AA
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| Protein sequence | MPAFAAFFVP LLVFAGCGGQ QSPGGPQAMP LAALKLKPAA AVVMQEFPAR IEGKVNVEIR
SQVDGILEKI YVDEGALVKA GQPLFRIDSR LYREQYNQAL AAQHAAEAAA SIARLDVDKL
EPLVRNKVVS DIQLKSAKAS LLAANANVEQ ARASAQSARI NLGYAVISAP VGGYIGTIPF
RTGSLIARSG STPLTMLSDV REVYGYFSMS EADFMQFRRQ YEGATLEEKI RNVPPVTLLL
ADGSSYPEKG ELEMVGGQFD ESTAAIAVRA VFPNENGLLR TGNTGRVRLE SRFEGVLLVP
QAATVEMQDK VFVFRLDKSG KVRRTAFTVS GKSGDSYIAG AELKPGDVIV TSGLGRLQDG
MAVKPVFDKA SQK
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