| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1431 |
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| Symbol | |
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| ID | 6356202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1536962 |
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| End bp | 1538401 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642669042 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001943470 |
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| Protein GI | 189346941 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.323587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCAA CGATAAAGAG TGTGTTCAGA GCCCTCCGGG CGCACGGTTT TCCGGTGTTT
CTCATTTTGG GGCTTGCCGC CTGCAGCGCC ACGGCGCCAT ACAGGCGTGC AGAGGTAAAG
CTGCCCGCAT CCTACCGGGG AGCCGGAGAA CTCTCAGGGC AGCAGGCGAT CGGAGAAATT
CCCTACCGCA GTTTTTTCTC CGACCCGGTG CTTGTTGCGC TTATCGATTC GGTAATGGTG
CGGAACTACG ATCTGCAGAT AGCGCTTAAA AACATCGATT ACGCCCAGGA GAGCCTCAAA
CAGGCGAAAC TCGGCTTTCT GCCATCGCTC TCGCTCAACG CATCGGGAGC GGTCAGCAGG
CCTTCCGACA ACAGCCTCAG TTCCCCGAGC CTGCAGCAGG CACTCGGACA GAGTTATTCC
GAGGACTATT CGCTCTCTCT GGGCACCTCC TGGGAGATCG ACATCTGGAG CAGAATCCGC
AGCAAAAAAA AGGGCGCGCT GGCCGGTTAC CTGAAAACCG TGGAAGCGGC AAAAGCCGTG
CGCACGAAAC TTGCCGCCGA TGTGGCGTCC GGCTACTACA ATCTCCGGAT GCTCGACGCC
CAGCTCGATA TAGCCAAAAG AAACCTTGCG CTGGCCGATA CCACCCTCCG TATGATCAGA
CTGCAGTACG ACGCCGGACA GGTCACCATG CTTGCCGTCG AACAGCAGGA TGCGGCCAGA
CAGGCCGTCC TGCAGACCGT GCCGCAGATA GAGCAGGGGA TCGCCGTGCA GGAGCATGCG
CTCAGTATTC TCACGGGCAA TTATCCCGGA GCGGTTGCGC GCGGCAGAAG CCTCGCTTCC
ATTCCGGTTG CGGACAACCT TCCCGCAGGC ATTCCTGCGT CGCTGCTGCA GAACCGTCCC
GATGTGCGAG AGGCCGAAAT GGCCGTGATG GAGTCGCATG CCGATATGGC CGCGGCAAAG
GCTGCCATGT ACCCTTCGCT GACCATTACA GCCCAGGGCG GGCTGAACTC TTTCCGCAGC
AGCAACTGGT TCACCACACC CGGCTCGCTT TTCGGCCTGG TTCAGGGCGC CATTCTCCAG
CCGATTTTCC AGCGGGGAGA GCTGAAGGCC GGGTACGAGA AGTCCCGCAT CCGCAGGGAG
CAGGCCGAAA TCGGATTCAA GCAGTCGCTC CTGAAAGCCG TCGGAGAGGT TTCGGACGCG
CTGGTTCGCC TCGACAAGCT CCGCGAGCAG GAGAGGGCGG CAGCGGCGCG GGTCAGGACG
CTTGAGGGGG CGGTGCGCAA TTCGAACATG CTCTTCAAAA GCGGCATGGC AACCTATCTC
GAGGTTATTT CCGTCCAGTC AGGCTATCTT CAGGCTGAAC TTGCTTTGGC CGATATCCGT
CGCCAGCACC TGACGGCCAT GGCGGAACTC TACCGTTCCC TCGGCGGAGG GTGGCGCTGA
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| Protein sequence | MQPTIKSVFR ALRAHGFPVF LILGLAACSA TAPYRRAEVK LPASYRGAGE LSGQQAIGEI
PYRSFFSDPV LVALIDSVMV RNYDLQIALK NIDYAQESLK QAKLGFLPSL SLNASGAVSR
PSDNSLSSPS LQQALGQSYS EDYSLSLGTS WEIDIWSRIR SKKKGALAGY LKTVEAAKAV
RTKLAADVAS GYYNLRMLDA QLDIAKRNLA LADTTLRMIR LQYDAGQVTM LAVEQQDAAR
QAVLQTVPQI EQGIAVQEHA LSILTGNYPG AVARGRSLAS IPVADNLPAG IPASLLQNRP
DVREAEMAVM ESHADMAAAK AAMYPSLTIT AQGGLNSFRS SNWFTTPGSL FGLVQGAILQ
PIFQRGELKA GYEKSRIRRE QAEIGFKQSL LKAVGEVSDA LVRLDKLREQ ERAAAARVRT
LEGAVRNSNM LFKSGMATYL EVISVQSGYL QAELALADIR RQHLTAMAEL YRSLGGGWR
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