Gene Clim_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1412 
Symbol 
ID6356183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1517711 
End bp1518772 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content49% 
IMG OID642669023 
Productphosphoesterase RecJ domain protein 
Protein accessionYP_001943451 
Protein GI189346922 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.595012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTAC CGGGATATGG GCGTAAGCTT GATTTGAAGG AATGGTCTCC AGTAATTGAG 
GCTCTGCTTG ATGGTCGGCA TTTTGTGCTG ACAACACATG AAAATTCTGA TGGAGACGGT
CTTGGCAGCG AAGTCGCTCT TGCTCTGGTT CTAAGGCAGC TTGGTCGAAC CGTTTCGATT
GTCAATCCCA CGGAAGTTCC CCCTAATTAT ACGTTTCTCA AGAAAGCAGG CGGCATTGTG
CTTTTTGACG GCCGTGATGA AGGCGCTATT CAGGAGCTCT CACTCAGCGA CGTTGTGGTT
GTGCTCGATG CGAACCTTGC CGAGCGGATT GGTTCGCTTC GTCCTCATGT TCAGTTCGCA
AAAGAGCTTG GAGGAATGAA GGTACTCTGT ATCGATCATC ACCTCGATCC GGAAGATTTT
GCAGATATCA TGATCTGTGA ACAGTATGCA TCCTCTACCG GTGAACTCGT TTACGATCTT
ATTCTGGCTC TCGAAGAGAA AACAGACAGG AAACTGCTCA CTCCGGAGGT TGCGAATGCC
CTCTATACCG CAGTCATGAC CGATACCGGT TCGTTCAGAT TTCCCAAGAC AACGCCTTAT
GTGTACCGTC TTGCCGGTGA TCTTGTCGAT AAAGGTGCGG ATCCGTCGCT GATCTATGAC
AGGGTTTATA ACTCACTGAC CCCCCAGGCA CTCAAACTGC TTGGTGCGGC CCTGAGCGCG
ATCACCATTT ATGATGACGG CATGATAGCC TCACTCTTTA TTTCACAGGA GATGATGAAA
TCGACCGGCA GTAAACTCTT TGATACCGAT CTGATCGTAA CATATCTTTT AAGCGTTCCG
TCAGTTCAGA TTTCCGTGCT CATGGTGGAA ATGATGGATG GAAGGGTAAA AGCGAGTTTC
AGGTCGAGAG GGAACATCTA TGTCAACCAT CTTGCCAGGA CCTATGGAGG TGGTGGCCAT
ATGAACGCGG CGGGCTGTCT TTTACAGTTT TCGGCAGAAA AAGCCAGGAA AGTCATTCCC
GAAGCCGTAA GGGCATTTCT GAACGCTCAT CATTCGGCAT AG
 
Protein sequence
MIVPGYGRKL DLKEWSPVIE ALLDGRHFVL TTHENSDGDG LGSEVALALV LRQLGRTVSI 
VNPTEVPPNY TFLKKAGGIV LFDGRDEGAI QELSLSDVVV VLDANLAERI GSLRPHVQFA
KELGGMKVLC IDHHLDPEDF ADIMICEQYA SSTGELVYDL ILALEEKTDR KLLTPEVANA
LYTAVMTDTG SFRFPKTTPY VYRLAGDLVD KGADPSLIYD RVYNSLTPQA LKLLGAALSA
ITIYDDGMIA SLFISQEMMK STGSKLFDTD LIVTYLLSVP SVQISVLMVE MMDGRVKASF
RSRGNIYVNH LARTYGGGGH MNAAGCLLQF SAEKARKVIP EAVRAFLNAH HSA