| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1407 |
|---|
| Symbol | |
|---|
| ID | 6356178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1512369 |
|---|
| End bp | 1513172 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642669018 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001943446 |
|---|
| Protein GI | 189346917 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATA AAACCGTTCT GACCATAGCA GGTTCCGACG GCAGCGGTGG TGCCGGAATA
CAGGCCGATC TGAAAACCTT TGCAGTTCTC GGGTGTTACG GCCTCTCTGC CATTACTGCA
GTTACGGCGC AGAATACCAA AGGGGTAATG TCGAGTCTCA CACTCCCCGT ATCGTGCATC
CGAGAGCAAA TAAAAGCGAT TCTGGGTGAT ATTCGGGTTG ATGCCGTAAA GATAGGAATG
CTTGGAAGTG CCGAAATAAT CAAAACCGTA GCCCGCCTCC TGAATACGAT CGATGTTCCG
GTTGTCCTCG ATACGGTTCT TAACTCTTCA AGCGGCAGAA GTCTGCTCGC TCCTGGGGCC
ATACCGGTTA TGATCGAATC GCTATTTCCG ATTGCCGCAC TGATTACGCC AAATATTCCG
GAAACAATAC TGCTCACAAA AGAACCCGAA TTGCTCTCAA CAAGAAAAAA AATTGAAGAT
GCAGCACAAA AGCTGCAGGC GATGGGAGCA TCGGCAGTTC TGATCAAGGG CGGCCACACG
GAAAGCGACC GTTGCAGTGA CTGCCTGCTC TACCGGAACG GGTTCAGATG GTTCAGTTCA
AAAAAGATCA TCTCGAATAA TACGCACGGC ACAGGCTGCA CGCTCTCATC TGCGATAGCT
GCCGGACTGG CTCATGGCCT GCCTTTGGAA TCAGCCGTGG AAAAGGCGAA AACATATACC
TTCGAAGCTA TCCGCGCAGG AGCCGCATAC CGGCTGGGAG AAGGAAGCGG TCCCCTGCAT
CACTGTTACC CGTTCTGGAA ATGA
|
|---|
| Protein sequence | MNYKTVLTIA GSDGSGGAGI QADLKTFAVL GCYGLSAITA VTAQNTKGVM SSLTLPVSCI
REQIKAILGD IRVDAVKIGM LGSAEIIKTV ARLLNTIDVP VVLDTVLNSS SGRSLLAPGA
IPVMIESLFP IAALITPNIP ETILLTKEPE LLSTRKKIED AAQKLQAMGA SAVLIKGGHT
ESDRCSDCLL YRNGFRWFSS KKIISNNTHG TGCTLSSAIA AGLAHGLPLE SAVEKAKTYT
FEAIRAGAAY RLGEGSGPLH HCYPFWK
|
|---|
| |