Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1398 |
Symbol | rpsP |
ID | 6356169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1503575 |
End bp | 1503976 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642669009 |
Product | 30S ribosomal protein S16 |
Protein accession | YP_001943437 |
Protein GI | 189346908 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000212857 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTAAGA TCAGACTTAA AAGAACCGGA AGAAAAAAAT TGCCGTTTTA CCAGATTGTC GCTGCCGACT CACGTGCACC GAGAGATGGC AAGTTTCTGG AAATTGTAGG CCACTACCAG CCAACAGCGA AACCGCATGC CGTCACAATC AAGAAAGACC GCGTTTCATA CTGGATGCAG ACCGGTGCAC AGCCGACTGA CACCGTGCGC AGTCTCATCC GTTCTACGGG TCTTCTTCAT GAATTGAGAC TTCGCAGCCT TGGTCGCAGT GAAGCTGATA TTACCGCCGA AATGGAAAAG TGGCAGCAGA ATCAGACTGA AAGACGCCAG AAACGTCTTG CCGTTAAAAC CCGTCGTCGT CAGGCCAAAA AAGCCGCAGA AGCAAAAGGC GCCGAAGCTT AA
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Protein sequence | MVKIRLKRTG RKKLPFYQIV AADSRAPRDG KFLEIVGHYQ PTAKPHAVTI KKDRVSYWMQ TGAQPTDTVR SLIRSTGLLH ELRLRSLGRS EADITAEMEK WQQNQTERRQ KRLAVKTRRR QAKKAAEAKG AEA
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