| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1396 |
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| Symbol | trmD |
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| ID | 6356167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1502300 |
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| End bp | 1503004 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642669007 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001943435 |
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| Protein GI | 189346906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00203535 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAC CATTACGGAT TGATGTGATT TCCGTCATTC CCGGCTTTTT CGACTCGCCG
TTGCAAAACG GCCTGCTCGC AATCGCCAGG AAAAAACAGT ATGCGGAAAT CCATGTTCAC
AATCTGCATG ATTACGGTCT CGGGCGGTAC AAGCAGGTTG ACGATACCCC TTTCGGCGGG
GGGGCCGGTA TGGTGATACG TCCGGAACCG GTTTTTGCCT GTGTTGAAAA GCTTCTTGCG
GAAAGAGAGT ATGATTGGGT TATCTTTCCG ACTCCGGATG GGAAACCATT CGACCAGCCG
CTTGCGAACC GGCTTTCACG CACAAAAAAC CTTATGCTTC TTTGTGGTCA CTACAAGGCG
GTGGACGACC GGATAAGGCA GATGCTGGTT ACCATGGAAG TTTCGATAGG GGATGTTGTC
GTTTCAGGAG GAGAGATACC CTCGCTTGTG ATCATGGATG CTATAGTCAG GTTGATCCCC
GGTGTCATCG GTGACGGAGA GTCGGCTCTG ACTGACTCCT TTCAGACCGG AATGCTCGAT
TCAGCCTACT ATACGAGGCC GGCCGAATTC AGGGGAATGA AGGTTCCGGA TGTACTTCTG
TCGGGACATC ACCGGAATAT AGAAAAATGG CGTTATGAGA ACGCCCTGCA GCGTACGCTT
CAACGGAGGC CGGACCTGCT TGATAAAAAG ATTTTTAATG AGTAG
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| Protein sequence | MMEPLRIDVI SVIPGFFDSP LQNGLLAIAR KKQYAEIHVH NLHDYGLGRY KQVDDTPFGG
GAGMVIRPEP VFACVEKLLA EREYDWVIFP TPDGKPFDQP LANRLSRTKN LMLLCGHYKA
VDDRIRQMLV TMEVSIGDVV VSGGEIPSLV IMDAIVRLIP GVIGDGESAL TDSFQTGMLD
SAYYTRPAEF RGMKVPDVLL SGHHRNIEKW RYENALQRTL QRRPDLLDKK IFNE
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