Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1377 |
Symbol | sucA |
ID | 6356147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1481100 |
End bp | 1483931 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642668987 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | YP_001943416 |
Protein GI | 189346887 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.850315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC AGGAAAACAG CTCTTCCTAT CTTTTCGGGG GAAACGCCCC GTATATCGAA GACCTTTATG AAGCCTATCT TGAAAATCCG GGTTCGGTTC CCGAAAACTG GCGCATGTAC TTCGATGCCA TGCAGCATCT CCCTGCGTCA GACGGAAGCG ACAGCCGGGA CATAGCGCAC TCGCCCGTTC AGGCATCCTT TGCCGAACGG GCCCGGCTGG GACCTATCTG CCGCGTGGTG GCGAGCCCTG ATGCCGAACT TGGACGCAAA CGCGTTTCGG TTCAGAAGCT GATCGCAGCA TACCGCAACA TCGGTTCACG CCGGGCTGAC CTCGATCCCC TCAAACGCCA GGAAAGACCC GCACTGCCTG ATCTGGAGCC ATCCTTCTAC GGTTTTTCCG ATACCGATAT GGATATTGTT TTTAACACGA GCAATACCTA TTTCGGAAGC GAAACCATGC CGCTCCGGGA GCTGATCGGA AATCTCCGGG AAACCTACTG CGGGACCCTC GGCATCGAGT TCATGTACAT CACCGATCAG ACCGGGAAAC GATGGTGGCA GGCAAAGTTC GAAACAATAC GCGCGAAACC CGATTTCAGC CCCGAGAGAA AAAAACACAT CCTCGAACGC CTCACAGCCG CCGAGGGGTT CGAACGTTAC CTCCATACCC GCTTTATCGG CCAGAAACGG TTCTCCCTTG AAGGCGGCGA CAGCTTTATT CCGGCAATGG ACGAAATCAT CCAGCGCGCC GGGAAAGCCG GTGTGCTGGA GATTGTCATC GGCATGGCAC ACCGCGGTCG GCTGAATGTT CTGGTGAACA TCATGGGCAA AAATCCGCTC GACCTGTTTG CCGAATTTGA AGGCAAACAT GCCGGCGACC TTCCATCCGG CGACGTAAAG TATCATCAGG GGTTCACAAG CGATATCGTA ACGCCCGGAG GCCCGGTAAA CCTCTCCCTC GCCTTCAATC CATCGCACCT TGAAATCGTC AACCCTGTTG TCGAAGGTGC CGTCAAGGCC AGGCAGGTCA GACGAAGCGA CCGGGACGGC TCGCAGGTAC TGCCGATTCT GGTCCACGGC GATGCGGCCT TCGCCGGTCA GGGCGTGATC ATGGAAACAC TCAACCTGGC TCTGACCAGA GGATACGGCA CCGGAGGTAC CGTGCATATT GTCATCAACA ACCAGATCGG ATTCACGACA TCCGATCCGA GAGACAGCCG TTCTACGACA TACTGTACCG ATGTCGTCAA AATGATCGAG GCTCCGGTGC TGCACGTCAA CGGCGACGAT CCCGAAGCCG TCGTGCTGGC TGCGCAGATG GCTCTCGATT ATCGGCAGGC ATTCAAACGG GATGTCGTAA TCGATATCAT CTGTTTCAGG AAACTTGGCC ATAACGAACA GGATACCCCG GCCATGACCC AGCCGCTGAT GTACAAAAAT ATCGACAAGC ACCCCGGAAC CCGTAAACTT TATGCCGACA GGCTTCTCTC TCAGGGCATC ATCAAGGCGA ACGATGCCGA GGCGATAAGC AAACAGTTCC GCAAGGATCT CGACGAAGGA CGCTACAGTG CCAATCCCGT ACTCGTCAAC AAAACCATTT TCACTGCCGA ACCTGGCCCG GGCCGAACCG AAACATCGGA AACCGGCGTA CCTCTGACAG AGCTGCAGAG AATTTCAGAA AAGATTACGC GTATTCCCGA AAACTTCAGG ATCCATCCGC TTGTTGAAAA GGTAGTGAAC GACAGGAGAC GGATGGGCCG GGGAGAACAT CCGCTCGACT GGGGAATGGG AGAGCACCTT GCGTTTGCCT CGCTCGTGGC AGGAGGATAT CCGGTACGTA TTACCGGTCA GGACAGCGGC AGGGGAACCT TTTCGCACCG CCATGCCGTC CTGCACGACC AGAACCGGGA AAAATGGGAT TCCGGCATCT ATATACCGCT GCAGAACGTT ACGGATAACC AGGCGCCATT CACCGTCATC GATTCGGTTC TCTCGGAAGA GGCCGTGCTT GGTTTCGAAT ACGGATACTC CATTTCGGCA CCCGATACGC TGGTGATCTG GGAAGCCCAG TTCGGCGACT TCGCCAATGG AGCCCAGGTA CTGATCGACC AGTTCATCAC ATCGGGAGAG GTCAAATGGG GTCTTGCCTC CGGCCTCACC CTCATGCTCC CCCACGGCTA TGAAGGCCAG GGGCCGGAAC ACTCTTCAGC ACGGCCGGAG CGATTCCTGC AACTGTGCGC CGAAAACAAC ATACAGGTCT GTCAGCCGAC TACGCCAGCC CAGATATTCC ATCTGCTGCG CCGCCAGATG ACGGCAATGG CTCTCAAGCC CCTGGTAATT CTTACGCCGA AATCGCTGCT CAGAAACAAA GAAGCGGTTT CAAGACTCGA CGAACTGTCG GAGGGACATT TCAGGAACAT CATCGGCGAT CCGGCTGCCG ATCCGAAAAA AATCACGAGA TTGCTGGCCT GCTCCGGCAA AATATACTAT GACCTCCTGA ACCGCCGACG GGAAAACACC ATGGAAAATG CAGCGGTCAT CCGCGTCGAA CAGCTCTACC CTTTCCCTTT CGAAGAGTTC TCCGCAGAGA TCCGGCGCTA CCCTGGGCTG AAGGAAATCG TCTGGTGCCA GGATGAGCCG AAAAATCAGG GCTACTGGCG TTTTCTCCAG CATTATATCA TGAATGCCAT GATCCCGGGG CAGCAGTTCG GTTACGCCGG CCGTCCTGCA TCGGCATCTA CAGCATGCGG TTACGCCGCC ATGCATGCAC TGCAGCAGCA GGCACTGCTC GATCAGGCCT ACGGCGAGTT CAGCGTTTTT TACAACAAAT AA
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Protein sequence | MIKQENSSSY LFGGNAPYIE DLYEAYLENP GSVPENWRMY FDAMQHLPAS DGSDSRDIAH SPVQASFAER ARLGPICRVV ASPDAELGRK RVSVQKLIAA YRNIGSRRAD LDPLKRQERP ALPDLEPSFY GFSDTDMDIV FNTSNTYFGS ETMPLRELIG NLRETYCGTL GIEFMYITDQ TGKRWWQAKF ETIRAKPDFS PERKKHILER LTAAEGFERY LHTRFIGQKR FSLEGGDSFI PAMDEIIQRA GKAGVLEIVI GMAHRGRLNV LVNIMGKNPL DLFAEFEGKH AGDLPSGDVK YHQGFTSDIV TPGGPVNLSL AFNPSHLEIV NPVVEGAVKA RQVRRSDRDG SQVLPILVHG DAAFAGQGVI METLNLALTR GYGTGGTVHI VINNQIGFTT SDPRDSRSTT YCTDVVKMIE APVLHVNGDD PEAVVLAAQM ALDYRQAFKR DVVIDIICFR KLGHNEQDTP AMTQPLMYKN IDKHPGTRKL YADRLLSQGI IKANDAEAIS KQFRKDLDEG RYSANPVLVN KTIFTAEPGP GRTETSETGV PLTELQRISE KITRIPENFR IHPLVEKVVN DRRRMGRGEH PLDWGMGEHL AFASLVAGGY PVRITGQDSG RGTFSHRHAV LHDQNREKWD SGIYIPLQNV TDNQAPFTVI DSVLSEEAVL GFEYGYSISA PDTLVIWEAQ FGDFANGAQV LIDQFITSGE VKWGLASGLT LMLPHGYEGQ GPEHSSARPE RFLQLCAENN IQVCQPTTPA QIFHLLRRQM TAMALKPLVI LTPKSLLRNK EAVSRLDELS EGHFRNIIGD PAADPKKITR LLACSGKIYY DLLNRRRENT MENAAVIRVE QLYPFPFEEF SAEIRRYPGL KEIVWCQDEP KNQGYWRFLQ HYIMNAMIPG QQFGYAGRPA SASTACGYAA MHALQQQALL DQAYGEFSVF YNK
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