Gene Clim_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1364 
Symbol 
ID6353774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1464809 
End bp1466230 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content56% 
IMG OID642668973 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_001943403 
Protein GI189346874 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA ACCTGACCAT ACACTGGTTC CGGCAGGATC TCCGTCTTGA GGATAACCCT 
TCACTCTATT ATGCCGCACT GAAAGGGAGC GTACTGCCGG TCTATATTCT TGACGACCGC
AACGCCGGCG ATTTCCGGAT GGGTGGAGCA AACCGATGGT GGCTGCACCA CAGCCTCGAA
TCGCTCAACC GTTCGCTGCA GGGACGCCTC ACCCTCCTGA TGGGAGATCC GCTGGAGATA
CTCCCTGCGC TTGCCGCATC GACTGGAGCG ACGAAAGTTT ACTGGAATCG CTGCTACGAG
CCCTGGAGAA TCAGCAGGGA CACAAGGCTT AAACATAAAC TCAGGGAACA GGGTATTACT
GCTGAAAGCT ACAACGGCTC GATGCTCTGG GAACCATGGG AAGTTCATAA ATCCGACGGC
ACTCCATACA AGGTGTTCAC TCCCTTCTAC AGAAAAGGAT GCCTCTCTGC CGCATCGCCA
CGCATGCCTC TGCCTCTCCC GGTCAAACTT GACTGCCCGA GCCCACCTGA AGAAAGCCTT
CCGCTTGAGG CGCTCGGACT GCTTCCCCGC ATACGCTGGG ACCGACAACT TGAACCCCAC
TGGACAATTG GCGAGAATGG GGCTCTCGAA AGACTTGCTA TCTTTCTGAA ACATGGACTC
CCTGGATACA GGGAGGGACG TGACTTCCCT GCCCGACCGA ATGTTTCAAG GCTCTCACCC
TCCCTTCATT TCGGGGAGAT CTCTCCAAAT CAGGCATGGC ACGGGGCAAT TGCCGCAGGA
AGCGGCATAG ACCTCGACCA TTTTCAGAGT GAGCTTGCAT GGAGGGAGTT TTCATACAGT
CTGCTCTACC ACAATCCCGG ACTTCCCGAA AAAAATCTGC AGAAATCGTT CGACCGCTTT
CCATGGGAGG AAAACCCTGC AGCACTTATG CGCTGGCAGC AAGGATTGAC AGGCTACCCC
ATCGTGGACG CCGGCATGCG TGAACTTTGG CAAACAGGAT ACATGCATAA CCGTATACGC
ATGGTTGCGG GATCGTTTCT CGTCAAGAAC CTGCTGCTGC ACTGGCACGA AGGCGAATCA
TGGTTCCGGG ACTGTCTGGC CGATGCCGAC CTTGCCATCA ACAGCGCGAG CTGGCAGTGG
ATAGCCGGAT GCGGTGCCGA TGCGGCGCCG TACTTCCGCA TCTTCAATCC GGTAACGCAA
GGACAAAAAT TCGATGCTGA CGGCAGCTAT ACGCGCAGGT ATCTCCCCGA ACTGGCACGT
CTTCCTGACC GGTATCTGTT CTCTCCCTGG GAAGCGCCCG TCAGCGTTCT CGCTGACGCG
GGAATCGCGA CAGGAAAAAC CTATCCGGAG CCAATAGTCG ATCTCAAGAG CTCGCGTCGG
CAGGCACTCG AAGCATATGC ACTCACACGG AATCATTCAT AA
 
Protein sequence
MSDNLTIHWF RQDLRLEDNP SLYYAALKGS VLPVYILDDR NAGDFRMGGA NRWWLHHSLE 
SLNRSLQGRL TLLMGDPLEI LPALAASTGA TKVYWNRCYE PWRISRDTRL KHKLREQGIT
AESYNGSMLW EPWEVHKSDG TPYKVFTPFY RKGCLSAASP RMPLPLPVKL DCPSPPEESL
PLEALGLLPR IRWDRQLEPH WTIGENGALE RLAIFLKHGL PGYREGRDFP ARPNVSRLSP
SLHFGEISPN QAWHGAIAAG SGIDLDHFQS ELAWREFSYS LLYHNPGLPE KNLQKSFDRF
PWEENPAALM RWQQGLTGYP IVDAGMRELW QTGYMHNRIR MVAGSFLVKN LLLHWHEGES
WFRDCLADAD LAINSASWQW IAGCGADAAP YFRIFNPVTQ GQKFDADGSY TRRYLPELAR
LPDRYLFSPW EAPVSVLADA GIATGKTYPE PIVDLKSSRR QALEAYALTR NHS