Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1360 |
Symbol | |
ID | 6353770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1458305 |
End bp | 1461538 |
Gene Length | 3234 bp |
Protein Length | 1077 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642668969 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001943399 |
Protein GI | 189346870 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGC ATCTCTATAC CGGAAACCGG ATGGAAACGC TTGTCGATGC GCTGGCGGAA GTTCTGCGTC GCAACCCGCC ATCCGTTTTC GAACCCGAGA AAATAGTGGT GCAGAGTCGC GGCATGCAGC GATGGATTTC CATGGAACTT GCCCGGCGGT TCGGCGTCTG GGCCGGTGCG GAGTATCCCT TTCCGAACAG GCTGCTGCAG CAGCTTTTCG AGGAGATGGA ACTGACGCAG CCCGATTCGG AGAAGTTTTC AAAAGAGACG ATGTGCTGGA CACTCATGCG CCTCCTGCCT GAGATGCTCG ATCGTGAGTT ATTTTCGCCC CTTCGCTCCT ACCTGCGGAA CGACCGGGAG GGGCTCAAGC TCTTTCAGCT CTCCGGCCGC ATCGCCGATA CCTTCGACCA GTACACCCTT TTCCGTACCG ACCTTCTCGC CGCATGGGAA GAGGGGCGAA ACGACGGGGC CCGCGACTGG CAGCCGGAAT TATGGCGGGC GCTGGTTGCA GAGAGTTCCG GCAAGCATCG TGGCCGTCTG AAAACCGAGT TCTGCCTCAA GGTTCGGCAC GCGCCGCTTC CTGCCGCCTT TCCGAAGCGG ATTTCTCTCT TCGGCATCTC CTACATGCCG CCCTACCATA TCGGGATGAT CGAAGCCCTG GCGACGAGGA TACCGGTCAA CATCTTCCTG CTGAGCCCGA CGCAGGAGTA CTGGTCGGAT ATCGTTTCCC GCAGAAAGCT CTTCCGGATG AGCGAGGGCG AACGGGAACT GAGCACCGAG GGCAATCCGC TGCTTGCCTC GCTCGGCAGA AGCGGCCGGG AGTTCGCCGA TCTCCTGCTC GAAGCCGGCG GAATCGAAAA CGAGCACGAC CTTTACATCG AACCCGCCGA CGACACCCTC CTGCACGCCC TGCAGTCCGA CATGCTCAAC CTCAGCGGTA CGGGGGAGGA GGGGGAGCGC CGTTCCTCGC CGGATCCCGC CGATCGTTCG GTTCAGGTTC ACTCCTGCCA CAATCCGCTG CGCGAGGTCG AGGTGCTGCA CGACAACCTG CTCGATCTTC TCGAACATCT TCCCGGACTG GAACCTCGTG ATATCGTCGT GATGACGCCC GAGATCGAGA TCTATGCCCC TTACATCGCC ACGGTTTTCG GTGTTTCCGG CGAGGGCGTA CCGCGCCTGC CGCATTCGAT AGCCGACCGC CGCATGCTCG ACGAGGGTGG CATCGCTCCG GCCCTGCTGA AGCTGCTCGA GCTCTACGGC AGCCGTCTCC CTGCTCCGGA GATTTTCGAT CTGCTCTCTT CGCCGCCGGT GAGCCGACGC TTCAGGCTCG ACGAAGAGGA ACTCGATACG ATTCGCGTCT GGGTAGCCGA TACGCGAATC CGCTGGGGTA TGGACGAACG TTCGCGAAGC GGCCTCGGCC TGCCCCCCTT CCGCGAAAAC TCCTGGAGGG CGGGGCTCGA GCGGCTGCTG CTCGGCTATG CCATGCCGGA CGAGGGGGTG CTCTCGGACG GGGTGCTGCC GTTTGACGTC GAGGGCGACG CGGAAACCCT CGGCAAGCTC GCCGATTTCA TCGATGCCGT CGATGCGCTC TCGGCAAGGT TCGATCGGCC ACGCACGCTC GACGGATGGC GGGATCATTT CATCTGGATG CTCGACACCT TTATCGACGC CGATGAGGAG GTCGAAAGGG AGCTCTCGCA CATCGCCGCC GAAATCGACA GACTGACGGA ACTCGCCGCA GAGGCCAATT TCGGGGGCGA GACGGCGGCC CCGGTGATGA TCGCCTGGCT GCGCGGCCGT CTCGAAAAGT TCGAGATGGG GCTTGGCTTC ATGACCGGCG GCATCACCTT CTGCGCCATG CTGCCGATGC GCAGCATTCC GTTCCGCGTG GTTGCCATGA TCGGCATGAA CGACGGGGCT TTCCCCCGCC AGCAGCGTCT GCCGGGTTTC GACATGATGT CGAGGGAACC GCGCAAGGGT GACCGCTCCG TCCGCGGCGA CGACCGTTAC CTCTTTCTCG AATCGATCCT CTCTGCACGC GACGTCCTCT ACCTGAGCTA TGTCGGCCAG AGCATCAGGG ACAACACGCC ACAGCCGCCC TCCGTGCTGG CGAGCGAACT GCTCGATGCC ATAGAGCGCG GTTTCGCATT TCCGGAAGGG GAGGACGCGA TATCGCGCAT GGTTGTCCGG CACAGGCTCC AGGGGTTCAG TCCCGCATAC TTCACCGAAG GGTCGCCGCT TTTCAGCTAC TCGGCCGATA ACTTCCTGGC GCTTGAACGT CGCCATGAGC GCAATGCAGG TAATGGGAGC AGGGGGCGAA ATCCGGTTGA AGCCCGTCCC TTTATGGACG AACCGCTTCC TGAGGCTGAC GACGGGGATC GCCGGGTGAC GATCGACGAT CTGGTGAAGT TTTTCGCCAA CCCCTCGGCA TTCTTTCTCG ACCGGCAGCT CGGGCTCAAA CCCTCTGCAG CGCTTCGTCC GCTCGAAGAG CGCGAGCCCT TCGGCGCCGA CGGCCTCGAC GCATACCTGA TGCGCCAGGA ACTGCTTGCA GCGGTGCTCG AAGGGGGAAA AGAAGAGGCT CTCCTGCCCC TGTTCCGGTC GAGAGGTCTC TTGCCGCCGG CCCGACACGG CGAATTGCTC TTCGGAGAGC TGCTTGCCGA GGTGAGGGAG TTCGCCGACA GGCTTCCGGA GCTTAAGGGG AGCGCTGCGC CTGCCGTACT TGAAGCCGAT CTCGACATCG GGGGATTCCG GCTAACCGGC ACGCTCGACC ATCTTCTGCC CTCCGGGCAG CTGCTCTACC GCTGCGCGAA GATGCGGGAG AAGGATCGCA TCGGTTCATG GATTCTGCAC CTCGTGCTCG GTGCGTGCAG TCCGGGTCAT ATGCAGGAGA CCCGTCTCGT CATGCTCGAC CGTGCCGTCA GGTACACTCC CGTAGCCGAC GCGGCAGGCA GGCTCGAAAC CATGCTCTCG CTTTACCGGC AGGGGCTCAT GGAGCCGTTG CCCTTCTTCC CCCGCGCCTC GACGGCCTGG GCAGGCAAGG CGGAAAAAAC GGAGCGCGAG CGTACCGAAG CCGCCCTGGC CGCATGGCGT GAAGGGTACG GCGGACGCGA AGGCGAGGGT GCCGATCCGG CCTTCCGCCG CTGTTTCGGC ACGGAGCCGC CCCTCGGCGA GCGCTTTGCA GCCATTGCCG AAGAGGTGTT ATTACCGATG CTTGAACACG GAGGGAAGGG ATGA
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Protein sequence | MTLHLYTGNR METLVDALAE VLRRNPPSVF EPEKIVVQSR GMQRWISMEL ARRFGVWAGA EYPFPNRLLQ QLFEEMELTQ PDSEKFSKET MCWTLMRLLP EMLDRELFSP LRSYLRNDRE GLKLFQLSGR IADTFDQYTL FRTDLLAAWE EGRNDGARDW QPELWRALVA ESSGKHRGRL KTEFCLKVRH APLPAAFPKR ISLFGISYMP PYHIGMIEAL ATRIPVNIFL LSPTQEYWSD IVSRRKLFRM SEGERELSTE GNPLLASLGR SGREFADLLL EAGGIENEHD LYIEPADDTL LHALQSDMLN LSGTGEEGER RSSPDPADRS VQVHSCHNPL REVEVLHDNL LDLLEHLPGL EPRDIVVMTP EIEIYAPYIA TVFGVSGEGV PRLPHSIADR RMLDEGGIAP ALLKLLELYG SRLPAPEIFD LLSSPPVSRR FRLDEEELDT IRVWVADTRI RWGMDERSRS GLGLPPFREN SWRAGLERLL LGYAMPDEGV LSDGVLPFDV EGDAETLGKL ADFIDAVDAL SARFDRPRTL DGWRDHFIWM LDTFIDADEE VERELSHIAA EIDRLTELAA EANFGGETAA PVMIAWLRGR LEKFEMGLGF MTGGITFCAM LPMRSIPFRV VAMIGMNDGA FPRQQRLPGF DMMSREPRKG DRSVRGDDRY LFLESILSAR DVLYLSYVGQ SIRDNTPQPP SVLASELLDA IERGFAFPEG EDAISRMVVR HRLQGFSPAY FTEGSPLFSY SADNFLALER RHERNAGNGS RGRNPVEARP FMDEPLPEAD DGDRRVTIDD LVKFFANPSA FFLDRQLGLK PSAALRPLEE REPFGADGLD AYLMRQELLA AVLEGGKEEA LLPLFRSRGL LPPARHGELL FGELLAEVRE FADRLPELKG SAAPAVLEAD LDIGGFRLTG TLDHLLPSGQ LLYRCAKMRE KDRIGSWILH LVLGACSPGH MQETRLVMLD RAVRYTPVAD AAGRLETMLS LYRQGLMEPL PFFPRASTAW AGKAEKTERE RTEAALAAWR EGYGGREGEG ADPAFRRCFG TEPPLGERFA AIAEEVLLPM LEHGGKG
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