| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1315 |
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| Symbol | |
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| ID | 6354508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1416028 |
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| End bp | 1419699 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642668930 |
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| Product | SMC domain protein |
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| Protein accession | YP_001943360 |
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| Protein GI | 189346831 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.082994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TCTCTTTACG CTTTAAAAAT CTGAACTCCC TTGCAGGAGA GTGGTTCATC
GACTTTACCG CGCCCGAGTA CGTATCGGAC GGTATATTTG CCATTACCGG ACCGACAGGT
TCGGGCAAAA CCACCATTCT CGATGCGATT TCGCTTGCTC TGTACGGTCA GACTCCGCGG
CTTGAAAAGG TCAATATGAG CGGTAACGAA GTCATGTCGA GGCACACGGG GGAGTGTTTT
GCCGAAGTGG TGTTCGAAGC CGGAAGCGGC CGTTACCGGT GCCACTGGTC GCAGCACCGT
GCCCGCAGAA ACCCGCAGGG TTTACTGCAG GCTCAGAAGC ATGAAATTTC GGACGAGACG
ACAGGAAAGA TCATCGAATC GAAACTGCAG GATACCCTTG CGGCGGTTGT GGAGTGCACG
GGAATGGATT TTCTCCAGTT CACGCGATCC ATGCTGCTGG CTCAGGGTGG ATTTGCGGCT
TTTCTGCAGG CTCCTCCGGA TGAGCGCTCT CCTGTGCTCG AGCAGATCAC CGGAACTGAA
ATCTACTCGG CCATTTCCAT AAAAGTACAC GAACGAAACC GTCTTGAGCA GCTGAAACTC
GATGCTCTCA GGGAGGAGTG TTCCGGCATC CGACTTCTGG GCGAAGACGA ACTTGCCGAA
GCCGTATTCG CTTTGAAAGA CAGGGAGGAG CAGGAGGACG GAATCGCCGG CCTGAAAAGC
AAGAGCGAGG AGGCGCTCCG ATGGCTCCGC CAGATTACCG TCATGAAAGC CGGACTGGCC
GGTATGGAGG AGGAGTTCCG GGAGCTTCGG AGCCGTGAGG AGCGGTTTTA TCCCGATCGG
CAGCGGCTTG AAAAGGCCAT GCAAGCCTCA CGTTTCGAGC CGGCATATAC CGCCGTCATG
CAACTCCGTC AGCTTCAGGA TCGGGATCTT CTGGATAAAA CCGTTGCGGA ACGTGAGCTG
GAGCGCTCGA AAGCGGTTTT TGAAGAGCGT GCCGGAGAGT TTCGGGTGGC GGAAAAGAGG
CTGCTGCTGC TGAAAGAAGA GGAGACGGCA CTCGCGGGAG TTATTCGCGT CGTCAGGGCG
CTTGATCTGC AGATATCGGC AGGGGAGGAA CGACGCTTTC AGTCCGAAAG TGCCTTGAAT
GTTCTGCAGA AAAGAATTGC CGCTTCCGAA GGGCAGCTTG CCGAAGCGGA ACGCGAGCTG
CTGTCTGAAC GGAAAAAAAT GGAGGATGCC GAACGGTATC TTTCGGAACA TGAAGCCGAC
GGCGGACTTG CGACGTCGCT GAGCGGCATC GAAGAGAAGG TTCGGCAGTG CCAGGCCACT
GAAACTGCCG AACTGGATGC GCGTAAAGTG CGCAATGATG CCTCGAAACG GCTTGAAAAA
GCCGCAATTG CCCTTCGGGA GCTGATGCCG GCGACTGCCG GGGCCCGGAA GGATTTCGAC
AGTTGTCTGT ACCTCCAAAC GGAACTTGCC GGTCAGCTTG AAGGGCTTCT CGAGGGCAGT
AGCCTCAGCG AACTGCGATC GGAAACTGCA CGGATTCAGG AACGGATCCG GGCTCTGGAA
ATCCTTCAGG CGAGGCTGAT GCAGCTCGCA GGTTTCGAAG AGCGCATCCT CACGGTGCGG
CAGGCTCTCA GGAGTGCGGA AGCGGAACTG AAACACAACT CCTTTGAACT CGACAGGATA
TCGCTGCTTC AGCGCAAGGA GGAACAGATC GTCGAGGGAC TTCAGCGAGA GGCGGAACTT
CATGGTAAAA TCAGGTCACT TGAGGATGAA CGCCGGATGT TGCAGGAGGG CTTGCCCTGT
CCTCTTTGCG GTTCCATACA CCACCCATTT GTCGGAGAAG ATCTGCCCGA CGCGGATATG
GCAGCCGATG CGCTTCGGCA GGGTCGTCTT TCCCTGCATG AGAGAGCCCT TGAGATCACC
GGACTGCGGG TTGCGGCGGC ACGTCTGGAG ACGGAGATCC GGCAGCTCCA TGGTCAGCGC
GACGAACTGC GCAAGTCCAT CGAGACTGAT CTGCAATGGT GCCGCCACTC TGCCGGAACG
CTTTCGATAG AGGGGGAACC CTCGGTGGAA AACATTGACG CAATACTCGA CAAACATCGT
CTTCTCTCCG TAAAACTTTC GGACAGGCTT GCCGCTGCGG AGCGGATAGA GGGGGCCCAT
ACTGCGGCAG CTCAGGAGGA AAAAAACTTC CAGCAGCGGC TGACGGAGGC CTTGCGGCAG
CAGGAGAGTG CCGGTTATGC GCTGAAAACG GCCGAAACGG AAGCCGCGAG GGCCGGGGAA
AGTGAAGCCC TGGCCGGGGA AAAACGCAAA ACCGCCGATG CAGTCCTGAA TCTGGAGCTT
GCGGATTACG CAATAGCTGC GGGAGACGGT CTGTCGTATC CTGACGTCCT GCGCCAGCTG
CATTCTCGTC TTGAGCGGCG GCAGGAGGTT GAGTTACGCA AAGATGCTGC CAGGCAGCGA
ATAACGGTTC TCGAGGGGTT TCGCTCAGTC CAGCAGGAGT TGCTGAAAAC GAACCGTGAG
GATTGTCTTC AGAAGGAAAC GGCTTATGCT GCCGAAGGGG CGGCCCTGGC AGGGCTGCAG
CGCCAGCGCG AAGGGTTGTT CGGATCGAAA AATCCCGACG CGGAGGAGGG TCGCGCGGCA
GAGGTTGCCA GGCTTGCCGA AGAAGTGCTC GAAGAGGTGA GGAGCGCGCG GGAGGTGGCT
TCTCGGCGAA TTGTTACCCT TTCTGAAAGA GTCGCCATGC TCGGAGCTTC TTCTGCAGAA
CGCTCCGTCA TGATTTCTGA GCGGCAGGCC CTGCTTGAGC ATGAACTTTC AGGAGGCGGT
TTTGAAAGCC TTGAACGTTT TCTTTCGGCC CGGCTCGACA GACATGAATT TGAACGGCTT
GAAAAACAGG CGGGAGCGCT TGCCGCGCGA CGCCTCGAGC TCGAAACCCT GAAAGGCGAA
CGGCTGGGCA AATTGCTGCA GGAGGAGGAG CGCGCGCTGA CCGACAGTTC CGAGGAAGTG
CTGTGTGAAG AACTTGAACG TTTTTCGGCC AGTCTCGGTA CGCTCCGTTC GGATATTGCC
GCCCTGAAGA TCAGGCTGCA GGAGCATGAG CGTTCAGCCC TCCTGCTGCG CGAAAAAACC
TCCGCGCTTG CCGCACAGCA GATCGAATGT GCCCGGTGGT CGTCGCTGAA CGAGCTTATC
GGCTCTTCGG ATGGCAAGAA GTTCCGCAAT TTCGCGCAGG GTCTTACCTT CGAGATCATG
ATCGGCCACG CAAACCGTCA GCTTGCAGGA ATGACAGACC GTTATCTGCT TGTCCGATCC
GCCGCCCATC CGCTCGCGCT CGACGTGATC GACACCTGGC AGGCCGGGGA GGTGCGCTCC
ACGAAAAACC TCTCCGGCGG CGAGAGCTTC ATCGTGAGTC TGGCGCTTGC GCTCGGGCTT
TCGCATATGT CGAGCCGGAA TGTCCGGGTC GATTCGCTCT TTCTCGACGA AGGGTTCGGT
ACGCTTGACG AGGAGTCGCT CGACACCGCC CTGAAGACAC TCTCAGGCCT CCATCAGAAC
GGCAAGATCA TCGGTATCAT CTCTCATGTC CCAGCCCTGA AGGAGCGCAT AGCCGCCCGA
ATCCGCGTTC ATCCGGTTTC CGGAGGCCGA AGCCGGCTTT CCGGCCCGGG CGTGATAGAG
GGAAACGGGT AG
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| Protein sequence | MKILSLRFKN LNSLAGEWFI DFTAPEYVSD GIFAITGPTG SGKTTILDAI SLALYGQTPR
LEKVNMSGNE VMSRHTGECF AEVVFEAGSG RYRCHWSQHR ARRNPQGLLQ AQKHEISDET
TGKIIESKLQ DTLAAVVECT GMDFLQFTRS MLLAQGGFAA FLQAPPDERS PVLEQITGTE
IYSAISIKVH ERNRLEQLKL DALREECSGI RLLGEDELAE AVFALKDREE QEDGIAGLKS
KSEEALRWLR QITVMKAGLA GMEEEFRELR SREERFYPDR QRLEKAMQAS RFEPAYTAVM
QLRQLQDRDL LDKTVAEREL ERSKAVFEER AGEFRVAEKR LLLLKEEETA LAGVIRVVRA
LDLQISAGEE RRFQSESALN VLQKRIAASE GQLAEAEREL LSERKKMEDA ERYLSEHEAD
GGLATSLSGI EEKVRQCQAT ETAELDARKV RNDASKRLEK AAIALRELMP ATAGARKDFD
SCLYLQTELA GQLEGLLEGS SLSELRSETA RIQERIRALE ILQARLMQLA GFEERILTVR
QALRSAEAEL KHNSFELDRI SLLQRKEEQI VEGLQREAEL HGKIRSLEDE RRMLQEGLPC
PLCGSIHHPF VGEDLPDADM AADALRQGRL SLHERALEIT GLRVAAARLE TEIRQLHGQR
DELRKSIETD LQWCRHSAGT LSIEGEPSVE NIDAILDKHR LLSVKLSDRL AAAERIEGAH
TAAAQEEKNF QQRLTEALRQ QESAGYALKT AETEAARAGE SEALAGEKRK TADAVLNLEL
ADYAIAAGDG LSYPDVLRQL HSRLERRQEV ELRKDAARQR ITVLEGFRSV QQELLKTNRE
DCLQKETAYA AEGAALAGLQ RQREGLFGSK NPDAEEGRAA EVARLAEEVL EEVRSAREVA
SRRIVTLSER VAMLGASSAE RSVMISERQA LLEHELSGGG FESLERFLSA RLDRHEFERL
EKQAGALAAR RLELETLKGE RLGKLLQEEE RALTDSSEEV LCEELERFSA SLGTLRSDIA
ALKIRLQEHE RSALLLREKT SALAAQQIEC ARWSSLNELI GSSDGKKFRN FAQGLTFEIM
IGHANRQLAG MTDRYLLVRS AAHPLALDVI DTWQAGEVRS TKNLSGGESF IVSLALALGL
SHMSSRNVRV DSLFLDEGFG TLDEESLDTA LKTLSGLHQN GKIIGIISHV PALKERIAAR
IRVHPVSGGR SRLSGPGVIE GNG
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