| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1288 |
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| Symbol | |
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| ID | 6356214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1387928 |
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| End bp | 1389967 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642668904 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001943334 |
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| Protein GI | 189346805 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA ACGCTCTTTC GGAAAAACCG CTCCTGATGC TTTCGCCGAA GTATCTTGCA
GGATTGTTTT CGCTGCTGGT GTTTCTCTTT CTCGGTACGG CGTTTTTCGA GTATCAATAC
CGGAAATCCG AGATCGAACA CATCATGCGC GAAGAGGCTG CACTGCTTAT TCATGCGCTG
AGGGTGGGAG CGGAAAATGC CATTACAGGT TACAACGAAA ACCGATCCCT TCTGACGGGC
AGCCTTTTCG ACCAGTTGCG TCTTCTTGAT CGTCTCGACA TGCAAAAACC GTTGACCTCG
ACGGATCTTT CCGTGATAGC CGGCAGCAGC GGAGTGTACC GTATCAATGT TTTTGACGGT
AACGGCCGGC GGATCGCGTT CAACACGCCT CCCGACCATA CACCTCTTGA ACAGACGTGC
GATCCTCGAC AGATGCTGCT GCCATTGTAT TCCGGTAAGC AGGATTCCCT GCTGCTGGGG
ATTCGTCCGA GTACCTCCGA CCGAGGCCCC CGCCTTATTG CTGCCGTCAG ACGTTCGAGA
GGAGGAGTGA TTGCCGCAAA TATCGATGCG TCGAAGCTGC TCGATTTGAG GCGCAGGCTG
GGAGTCGGGC AGCTTATCCA GCGTATCGGT GCCGATACCA CAGGCATTGA GTACATCATA
TGGCAGGACT CGAGCGCCAT TCTCTCTGCA ACGCCAAATG TATCGAAAGT GGATCCCGTA
CATGCCGATC CGTTTCTCCT CTACGCCTTT CGTTCGACTT CAGCGAAAAC CCGCATGACG
ACATGCAAAG GGAAACCGGT TTTCGAGGTG GTCAAACCTT TTTATTATAA CGGCATCAAT
GTAGGCCTGC TGCGCATAGG CCTGAAAACC GACCATTATG ACATAACCGC AGCCAAGCTT
CGCAACCGGC TGTTCATGCT TGTCGGTCTT GTCGTTATCG GATCGCTCTT CATGTTCAAT
CTTATTGTGA CGCGCAGGAG TGAAGCCGAA ATGAAGCATG CCTGCGAACG GGCTCAGAAT
TTTTCGTCAG TTATTCTTGA AAGCATGGCA GACGTGGTGG TCGCCGTAGA CGCAGCCGGA
AAAATAACCA TGATCAACAC TCCGGCTGAA AAACTGTTCC GGATCTCTTT ACGGGAGGTC
TTCGGCAAAT ATGTGAACGA AGTTATTCCC GAATCCGCTC CTTTCCTTGA TGGTATCGTC
TCTGGCCGGC ATGCGATGCT TGACCGGGAG TTCCACTGCA GTGCCGGAGG CCGTCAACTC
CTGCTGGCCG GAAATTTCAG TCTGATTACA GGCAGGGATA GCCGTATCGA GGGAGCCGTA
GCCGTACTTC GCGACCTGAC CGAGCAGCGA GCCATGCAGC AGGTAATCGA TCGTCAGGCG
AAACTCCAGG CTATGGGCGA ACTTGCTTCG GGTGTTGCTC ATGAGATCAG AAATCCCCTG
AACGCCATCG GGATTCTGGC TCAACGTCTC GATATTGAGT TTTCGCCTGC TGTCGACGAG
CCCGAATATC GCCATCTGGT TCGAACCGTG GTATCCGAGG TCCATCGACT CAACGCAATT
ATTCAGCGTT TTCTGAAGTT CGGCCGTCCG CCTCTGCTTA TGCCGGTACC GGTGCATCTT
GCTGACTTCG TCAGGAGCTA TGGTACTGTT CTGCAAAGCG AAGCGGAAAA GAAAAGCATC
CGGTTTACGC TAAAGGCCGA CTGTGACAGA ACGGTGCTGA TCGACAGGGA GCAGATGCAG
CAGGTGCTGC TCAACATCAT ACGCAATGGT GTTGAAGCTA CTGCAAAGGG AGGAAGTATT
ACGATCAGGG TATTCTGCCG TGGCAGCCGG TCGGTCATCG AGATCGCCGA TAGCGGGACG
GGAATTCCTG CCGCGAAACT GCCGGAAATA TTCAACCTGT ATTTTACCAC CAAAAATGAC
GGCTCCGGTA TGGGGTTGAG TATCGCAAAC CAGATCGTCC ATGCACACGG CGGCTTGATC
GAGGTTTCGA GCAGGGAAGG AGAGGGAAGC GTGTTCAGCA TTGTGCTGCC CGCTCTGTGA
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| Protein sequence | MKRNALSEKP LLMLSPKYLA GLFSLLVFLF LGTAFFEYQY RKSEIEHIMR EEAALLIHAL
RVGAENAITG YNENRSLLTG SLFDQLRLLD RLDMQKPLTS TDLSVIAGSS GVYRINVFDG
NGRRIAFNTP PDHTPLEQTC DPRQMLLPLY SGKQDSLLLG IRPSTSDRGP RLIAAVRRSR
GGVIAANIDA SKLLDLRRRL GVGQLIQRIG ADTTGIEYII WQDSSAILSA TPNVSKVDPV
HADPFLLYAF RSTSAKTRMT TCKGKPVFEV VKPFYYNGIN VGLLRIGLKT DHYDITAAKL
RNRLFMLVGL VVIGSLFMFN LIVTRRSEAE MKHACERAQN FSSVILESMA DVVVAVDAAG
KITMINTPAE KLFRISLREV FGKYVNEVIP ESAPFLDGIV SGRHAMLDRE FHCSAGGRQL
LLAGNFSLIT GRDSRIEGAV AVLRDLTEQR AMQQVIDRQA KLQAMGELAS GVAHEIRNPL
NAIGILAQRL DIEFSPAVDE PEYRHLVRTV VSEVHRLNAI IQRFLKFGRP PLLMPVPVHL
ADFVRSYGTV LQSEAEKKSI RFTLKADCDR TVLIDREQMQ QVLLNIIRNG VEATAKGGSI
TIRVFCRGSR SVIEIADSGT GIPAAKLPEI FNLYFTTKND GSGMGLSIAN QIVHAHGGLI
EVSSREGEGS VFSIVLPAL
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