| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1282 |
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| Symbol | |
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| ID | 6355383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1382565 |
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| End bp | 1383905 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642668898 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001943328 |
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| Protein GI | 189346799 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0406152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA ATGCCATAAA CATGCCGATT GCGATCAGAT CCTTTTTTTT TACACTACTG
CTGCTTTGGT TTGCGCCCTC CAAACCGGCA GAGGCTGCCG GGTCGCTGAC GCTGCAGGAT
GCCATAGGTG AGGCGCTCGA ACGCAACCCT TCGGCGGGTA TGGAGCGCCA GAAGCTCCGA
CAGCTCGAAG CGGACTACCG TGCGGCACGC GCGGGGCTGC TGCCGCATCT GTCGGCAAGC
GCATCCTACA GCCGCTTTGC TCCGGATCGT CTCGCCATGA CCGCTCCATC GGGAGTGGCG
CTTTACGAAC GGGAGGCATA CGGCGGCATC GGCCTGAGCC AGCTGCTTTT CGATGGTAAA
ACCAACGCCA TACGCAAGGC GGCCGCTACG GCAGCCGGCG CACAGGAAGC CCAGGTGGCT
TCGGCGGAGA ATATTGCGGC ATATCAGGCG ACAAAAGCAT TCATACAGGT ACTTGAATCG
CGTGCGCTCC TGCAGGCTGC CGAACAGGCA AGGCAGCGTG CCCGCACATT CGAGGCCATG
ACCGGAGCCT ATTTCGATGC CGGCAAGGTC ACCCGTCTCG ACCTGCTGCA GGCTCGCAGC
GGAAGGCTCG AAGCCGAAGC TTCCCTTGTC AGGGCGCAGG AACTCGGCCA GACAGGGATG
GCACTGCTTG CCGCCGTCAT CGGGCGGGAG CTTCTCGATT TTACGGTGGA TGGCCGGCTG
CCGGCTGCCG TCCCGCCCGT ACCACCGGAT TCGATGGCCA TCGAGGTAGC CATAGCCCGC
AACCCGGACA TGCATCGTTC GCGGAAACTG GCCGATCGTG CCGGTTATTC TGCCGATGCC
GCCCGAGGGG CCCTCTATCC CGCAATTACC GCAAAGGCGG GGCTTGGATA CCGTGACCGC
GACATCGGCG GAGGTGCCCG CGAATGGACG GCCGGGCTGC AGCTCGATCT GCCGATCTTT
GATGGAGGCG CCCTGCGTGC CGGTATCGCC AAAGCCGATG GCGCCCTGGC CGAATCACGC
GAATCCGAGC GATCTGTCAG GCTTGCCGTG CAGTCGCAGT TGAGGCAAGA ACTTTCTGCA
TGGCGCACGG CCGCAGCCGA CGTCCGATCG GCAGATGAGG CCATCGCAGC GGCCCGCGAA
TCCCTCGATG CTTCCCAGGC CCTCTACCGG GCAGGCAAGG CTACCGCACT CGACATACTG
ACGGCGCAAC TCGGCCTTTC AAGGGCCGAG ACCGAACGCG CCGGCGCCCT TGCCGGTTAT
GCAATTGCAC GGGCAGGCGT GGACCTGCTC ATAGGCTCCA GTCGAAGCTT CACCCTCAAC
AGTAAAGGAG GAACTCCCTG A
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| Protein sequence | MMNNAINMPI AIRSFFFTLL LLWFAPSKPA EAAGSLTLQD AIGEALERNP SAGMERQKLR
QLEADYRAAR AGLLPHLSAS ASYSRFAPDR LAMTAPSGVA LYEREAYGGI GLSQLLFDGK
TNAIRKAAAT AAGAQEAQVA SAENIAAYQA TKAFIQVLES RALLQAAEQA RQRARTFEAM
TGAYFDAGKV TRLDLLQARS GRLEAEASLV RAQELGQTGM ALLAAVIGRE LLDFTVDGRL
PAAVPPVPPD SMAIEVAIAR NPDMHRSRKL ADRAGYSADA ARGALYPAIT AKAGLGYRDR
DIGGGAREWT AGLQLDLPIF DGGALRAGIA KADGALAESR ESERSVRLAV QSQLRQELSA
WRTAAADVRS ADEAIAAARE SLDASQALYR AGKATALDIL TAQLGLSRAE TERAGALAGY
AIARAGVDLL IGSSRSFTLN SKGGTP
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