Gene Clim_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1265 
Symbol 
ID6355366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1365994 
End bp1366611 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content51% 
IMG OID642668881 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_001943311 
Protein GI189346782 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA GAAAAAAAAT TCCCTCAAAA AAACCACTGA GCGAGGTTCG TTTTGTTGTT 
TTTGACACCG AAACAACCGG ATTCGACCTG AAAACGGACA AAATCATCTC TATCGGAGCG
ATTGCGCTTA CGGCACAGCG AATCGAAGTC GGTGATTCGT TCGAGGTGCT GGTAAGACAG
GAAAAAGTAG GGGATCGTGA TGCGGTAAGC GTGCACGGCC TGCTTCGCAA GGATATTGCA
TCGGGCATAG ACGAGAAAAG CGCGGTTACG GCATTCCTCG ATTATATAGG CAACAGCGTT
CTGGTTGCCC AGCATGCCGG TTTTGACATT ACCATGGTCA ACCGGGTGCT TTGGAAGCAT
TTCGGCATCC GCCTTTTCAA TGATGTCGTC GATACGGCGA GTCTGGCCAA AAGGCTTGAA
AAAGGGCCTT ATTACAACCT TGCGCACAAG GCAGGGGAGT ATCGGCTCGA CAATTTATGC
GAGCGTTACA ATATACGCCT TCACGATCGC CACACGTCCG CAGGTGACGC CTACCTGACC
GCACAGCTTT TTCAGCGCCT GCTGGCAAAG GGAAAGAAAT CCGGAATCGA TACCGCGGGC
TCCTTGCTGA TGACGTAG
 
Protein sequence
MENRKKIPSK KPLSEVRFVV FDTETTGFDL KTDKIISIGA IALTAQRIEV GDSFEVLVRQ 
EKVGDRDAVS VHGLLRKDIA SGIDEKSAVT AFLDYIGNSV LVAQHAGFDI TMVNRVLWKH
FGIRLFNDVV DTASLAKRLE KGPYYNLAHK AGEYRLDNLC ERYNIRLHDR HTSAGDAYLT
AQLFQRLLAK GKKSGIDTAG SLLMT