| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1262 |
|---|
| Symbol | pyrC |
|---|
| ID | 6355363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1363484 |
|---|
| End bp | 1364806 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642668878 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_001943308 |
|---|
| Protein GI | 189346779 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTA TTTTTCAGAG GGCACATCTG CTCAATCCGG CTGAAAACCT CGATGCAACC
GGATCAATCA GGATCGATGG ATCGGGCTTT ATCGAATCCG TCTCCCTTGG CAGCGCCGAT
ATGCCGCATA ACGATGACGA CCGGGTTATC GATCTCGACG GCAAACTGCT TGTTCCCGGT
CTTTTCGACA TGCACTGCCA TTTCCGGGAG CCGGGACAGG AGTACAAGGA GACGCTTGAA
ACCGGTTCTT CGGCAGCAGC AGCCGGAGGA TATACCGGCG TTGCGCTCAT GCCCAATACC
CGTCCCGTAA TCGACAGTCC GCTTGGCGTC GCCTATATCC GGCATCATTC CGCCCTGCTG
CCGGTCGATC TGGAAGTCAT CGGCGCCATG ACCGTCGAAA GCCGGGGGGA AACTCTCGCT
CCTTTCGGGA AGTTCCGCTC TTACGGCGTT ACTGCCATCT CGGATGACGG CACCGCCATT
CAGAATACCC AGATCATGCG GCTTGCATTC GAATATGCTT CAAATTTCGA CCTGCTCATC
ATTCAGCACT GTGAAGATAA AACGCTGACA AAAGGCGGGG TGATGAATGA AAGCCATTTT
TCAACCATTC TCGGTCTGAA GGGCATTCCC GATGTAGCGG AAGCCATTAT CGTTTCCCGA
GATCTTCAGC TCATGAGATA TCTCCAGCAG CATAAGTTGC ACGATCCGCT CAATCAGCCC
CGTTACCACG TGGCGCATAT CAGCACCGGA GCGGCGCTCG ACCTTGTCAG ACAGGCAAAA
CTCGATGGGC TGCAGGTCAC CTGTGAAGTG ACTCCCCACC ATTTCACCCT CAGCGACGAA
GATCTGTTCC TGGCTGAAGC GAAAGGAAAC TTCATCATGA AGCCACCTCT CGGCTCTGCC
GAAAACATGC AGGCTCTGAT CGATGCCATT GCCGACGGCA CGATCGATGC CATTGCGACC
GACCATGCTC CACACGCTGC TCACGAAAAG GATTGTCCTC CCGATCAGGC GGCGTTCGGG
ATAACCGGAC TGGAAACCGC CGTAGGGCTC ACTCTGACGG AACTGGTGTC AAAAAATGTT
ATCACTATGC AAAGAGCCAT TGAAATGCTT TCGGTCAATC CAAGGAAGAT CATGAACCTT
GCTCCGGTTC ACTTCAGGGC AGGAGAAATG GCAAATATGA CCATCATAGA CCCTGAAGTC
GAGTGGACGG TCACAAAGGA TGATATGAAA TCCAGGTCAC AGAACACCCC GTTTATCGGA
CGCAGGCTCA AAGGGCGGGC TGTCGGTATC TATCACAAAG GAGCGTTGCT TGAAAACCGT
TGA
|
|---|
| Protein sequence | MSTIFQRAHL LNPAENLDAT GSIRIDGSGF IESVSLGSAD MPHNDDDRVI DLDGKLLVPG
LFDMHCHFRE PGQEYKETLE TGSSAAAAGG YTGVALMPNT RPVIDSPLGV AYIRHHSALL
PVDLEVIGAM TVESRGETLA PFGKFRSYGV TAISDDGTAI QNTQIMRLAF EYASNFDLLI
IQHCEDKTLT KGGVMNESHF STILGLKGIP DVAEAIIVSR DLQLMRYLQQ HKLHDPLNQP
RYHVAHISTG AALDLVRQAK LDGLQVTCEV TPHHFTLSDE DLFLAEAKGN FIMKPPLGSA
ENMQALIDAI ADGTIDAIAT DHAPHAAHEK DCPPDQAAFG ITGLETAVGL TLTELVSKNV
ITMQRAIEML SVNPRKIMNL APVHFRAGEM ANMTIIDPEV EWTVTKDDMK SRSQNTPFIG
RRLKGRAVGI YHKGALLENR
|
|---|
| |