Gene Clim_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1261 
Symbol 
ID6355362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1362697 
End bp1363437 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID642668877 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001943307 
Protein GI189346778 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGAT CGATAGAATC ATCTTCAATT ACTCCAGGAA CCGTTTACTG CATCGCAAAA 
AACTACCCTG AACATGCCAG AGAAATGCTG CTCTGGGAAG AAAGCCCTCA GCAGTTTGTT
CCTCCGGCCG AACACCTCGA GCCGATCGTT TTTATCAAGC CCCCTTCAGC GGTGGAAACC
GGCGGCATAA CACAGATTCC TGAATTTGAA GGCAGACCGC TCTCCGAGAA CATGCATTTC
GAAGCTGAAA TCGTCCTGCT CATCGGCATG GATTGCGACG ACTGTCCGGA AGAGGACGCC
ATCAAGGCCG TCAAAGGTTA CGGTGCCGGC CTTGATATGA CGCTTAGGGA TGTGCAGCTC
GAAGCAAAAA AACAGGGGGA CCCTTGGCTG AAAAGCAAAG GGTTTAAAAA AAGCGCCCTG
ATATCCGATT TCGTTCTCCG CAACGAGGCC GGCAGTTGGC AGGATCTTGA AATATTTCTT
GACTGCAACG GAAAGCGGGT TCAACACGGT TATTTCTCGG ATGCCATTTT TTCTCCGCCT
TTTCTTGTTC ATTATCTCTC TGCTCTGTAC GGACTTCGCA AGGGCGACCT CATCTTTACA
GGAACGCCGG CAGGTGTCGG ACGGGTCGCT GCCGGCGACA TGCTTGAAGC AAGACTCTGC
AAACGCAGCA GTTTCGAGAA TGAATCCTAT GAACTTACGG CACTCACAGC TACGGTTCTT
CAGGGAATGT CCCGGCACTG A
 
Protein sequence
MSRSIESSSI TPGTVYCIAK NYPEHAREML LWEESPQQFV PPAEHLEPIV FIKPPSAVET 
GGITQIPEFE GRPLSENMHF EAEIVLLIGM DCDDCPEEDA IKAVKGYGAG LDMTLRDVQL
EAKKQGDPWL KSKGFKKSAL ISDFVLRNEA GSWQDLEIFL DCNGKRVQHG YFSDAIFSPP
FLVHYLSALY GLRKGDLIFT GTPAGVGRVA AGDMLEARLC KRSSFENESY ELTALTATVL
QGMSRH