Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1255 |
Symbol | |
ID | 6355356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1356760 |
End bp | 1357488 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668871 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_001943301 |
Protein GI | 189346772 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0691404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAG TTCTTTCTCT CGGCCAGCGC GTCAAAGCAC TTCGTGATCA TTTTGCTCTC CGTCAGGATG AGTTCGGGAT AAAAATAGGT ATTTCCGGCA ACCGGGTTTC CGAAATCGAA AACGATAAGG GCGGAACGAC CGCATCCGTT CTGATGTCTC TGTGCAGGGA ATTTCCCGTC AATCCGGAAT GGATGCTCTC CGGCAGGGGC AAAATGCTCA AAGGCGAGGC AGAAACCTCG TTGCCCGAAG TTGATTTCGG AATCCGCCTC AATCTGCTTG AACGTCAGAT GCGTCATGTT CTGCATGGTG GGGCTGAGCG TGATACAGGA GAGCAGCTTG CGAGAGTCCC CCTCTATATC GCTGCAGTCC CCGCAGGTAC GCCCGATATA GCAGGCGGCG AGGTCGAAGA GTATCTCGAT ATGCCTTCAT CCTGGATTCG GGGTAAAAAG AACATCTATG CGCTCAAGGT CAACGGCGAC AGCATGATCG ATATAGGCAT CATGCACGGC GATACACTGC TTGTCGAAGC AACAGAAAAA GCCAAACACG GTCAGGTGGT CATAGCAAGC ATCAACGGCG AAGTGACCGT CAAAACACTC TCCATCAGCG TCGGCGGAGC GGTTTCGCTT GTCCCTGAGA ACCCGATCTA TCACCCGATA GCCATCACTC CCGACATGGA TTTCCGCATT CTCGGTACCG TCCTCGCCGC AGTACGGCAT TACGGATAA
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Protein sequence | METVLSLGQR VKALRDHFAL RQDEFGIKIG ISGNRVSEIE NDKGGTTASV LMSLCREFPV NPEWMLSGRG KMLKGEAETS LPEVDFGIRL NLLERQMRHV LHGGAERDTG EQLARVPLYI AAVPAGTPDI AGGEVEEYLD MPSSWIRGKK NIYALKVNGD SMIDIGIMHG DTLLVEATEK AKHGQVVIAS INGEVTVKTL SISVGGAVSL VPENPIYHPI AITPDMDFRI LGTVLAAVRH YG
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