Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1236 |
Symbol | |
ID | 6355337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1334081 |
End bp | 1336660 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642668852 |
Product | hypothetical protein |
Protein accession | YP_001943282 |
Protein GI | 189346753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCAC CGGAAGAACG ACTCGGCTCC TTTTATCTCG GCGCTGAATA TGATCTCGCT TCATCAAAGC GCCTTGAAAA ACCCGTCCAT TATGACGCGC GGGATCTGAC AACCCACGCA GTCTGCGTCG GAATGACCGG CAGTGGCAAA ACCGGCCTTT GCATCGGCCT GCTTGAAGAG GCAGCGCTCG ACAAGGTTCC GGTTATTCTG ATCGATCCCA AGGGAGATAT GACCAATCTC CTTTTGCAGT TTCCTGAGCT GCTGCCTGAA AACTTCCAGC CCTGGATCAA TGAAGACGAT GCCCGGCGCA AGGGAGTGAG CTCTGATGCG CTTGCGGCTT CAACCGCCGA ACAGTGGAAA ACCGGTCTTG CCGACTGGGG GATAACTCCA GAAAGGATCA GGCTGCTTGG CCAGTCTGCC GACTATACCA TATATACTCC GGGTTCCGAT GCCGGCGTTC CGGTCAGTAT TCTCGGCAGC CTTGCCGCTC CCCGCCTCGA TTTTGAGGAA CATGCCGAAA CCATCCGTGA GCGTATCACC GGTACCGTCA ATGCTCTGCT CGGACTGGCC GGCATCAAGG CCGATCCGAC GAGAAGTCGC GAATCGATTC TGCTGGCCGG AATTTTCGAA CACTTCTGGA AAAAAGGGGA AGATCTCGAC CTTACCGCTC TTATCACTTC CATCCAGAGC CCGCCAATGC GTCAGGTCGG AGTTTTCGAC GTCAATACCT TTTATCCCGA AAAAGAACGC TTTGAACTCG CAATGGCATT CAACACCCTC ATAGCCTCCC CTTCCTTTCA GAGCTGGCTT TCCGGAGATC CTCTCGATAT AGACCGGATG CTCTATACTG CAGAGGGTAA GCCACGTCAC AGCATTTTTT ATCTGGCCCA TCTTTCAGAG AGCGAACGGA TGTTTTTCGT TACGCTGCTT CTGGAGAATG TGCTTACCTG GACCCGTGCA CAATCCGGCA CGTCAAGCCT TCGGGCGCTG CTCTACTTCG ACGAGGTTTT CGGATACCTT CCTCCTGTCG CAGAACCGTC GTCAAAACGT CCGCTTCTCA CGCTGCTCAA GCAGGCCCGC GCATTCGGAC TCGGCTGTGT GCTGGTAACC CAGAATCCGG TCGATCTCGA TTACAAAGGT CTGACCAATA CCGGAACCTG GTTTATCGGC AAGCTTCAGG CCGAACGCGA CAAGCAGCGA GTGCTCGAAG GGCTGAAAAG CGCAATTGCC GAAGCAGGTG GATCGGGTGG ATCCGTCGAT TACGACAGCA TCATCAGCCA GCTCGGCAAC CGGGTTTTTC TGCTCCACAA TGTTCACGAA GACCGCCCGG TTGTCTTTCA GACCCGCTGG GCGATGAGTT ACCTCTCCGG ACCGATGACA AGACCGCAGA TCAAAAGACT CATGGCCCCC CGTAAAGCGG CAGCAGAACC AAAACCCTCG GTCTCCCCTG CTCCAGCCTC TGATGCGGTA ACATTGCCGC CAATGGCATT CGCAAAAGAA GATCTCTCCG GAGGGGACGG TACCGCTCTT CCATACGGTT TCACCGCAAC CCCTCCGGGT CTTGACCCAT CGGTAAAGCA GCTGTTCGTA CCGGTCGCAA TCGACGCTCG GGCTGCGCTT GAAAACTACG CCCGTCAAAC GGGCAGCATG CCTGTTGTAA GTGCCCGGCA ACTGGTCTAT GAACCCGTGG TCATCGGTTC GGCTTCTGTG GCTTTTTCCG ACCGCAAACG GGGAATCAAC GAAAATCTGC GCCTTGTCGT TGCGGCTGTC GCCTCTGCAT CAATGTCCGG AGCCGCATCA TGGGATGAGA GTGAAAAGCT TGCCGCCGGG CAGGAGCATC TTTCCGTGCT GCCCGATAAC CGTGCGGCAG CATTTGCATC GCTACCGGAT AATCTCAGTA CTTCCCGCAA TCTCTCGGCC TGCGGTCAGC CATTTGCCGA TTGGCTCTAC TATCACTCTC GTTTTCAGCT GACCGTGCAT CCCGGCAGCG GTCTTTTCCG ACGCAGCGGA GAGAGTGAAA GGGAGTTTTC CATTCGTCTG CAGCAGGCTG CGCGGGAAAA ACGCGATCAG GAGGTTGATG CGCTTGAAAG GAAGTATGCA CCTCAGCTTG AGCGCATTCG AGAAAAGATA CGGCGCGAGG AACGTGAACT GGCCCAGGAT GAGGCTGAAC ACCAGAGCCG CAAAACCAGC GAACTCGTCG GGCTTGGCGA AAGTGTGCTT GGCTTTTTTC TTGGGAGAAA AAGCACGCGT GGTATCGGCA CTGCCATCAC CCGTCGAAGG ATGACCTCAA ATGCAAAAGC CGATATAGAG GAATCTCACG ACACGATAGC CGAACTGAAA AAGGAACAGG AAACTGTTGG AGCGGAAATG CAGGCGCTTG TCCACGAAAT TTCAGCAAAG TGGGAGCATC CGGAAGCTGA ACTGACAAGC GAAGAGCTGG CGCCCCGCCG AGGCGACGTG ACGGTGAATT TTGTCGGGCT CGGCTGGCTT CCATTCTGGA GGTTGACCAT TGCCGCTCCC GAGGGCCTCA CGACGGTATC CGTCCCTGGG TATGAACTGG CGGAAACGAT AGAAAAATAA
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Protein sequence | MQAPEERLGS FYLGAEYDLA SSKRLEKPVH YDARDLTTHA VCVGMTGSGK TGLCIGLLEE AALDKVPVIL IDPKGDMTNL LLQFPELLPE NFQPWINEDD ARRKGVSSDA LAASTAEQWK TGLADWGITP ERIRLLGQSA DYTIYTPGSD AGVPVSILGS LAAPRLDFEE HAETIRERIT GTVNALLGLA GIKADPTRSR ESILLAGIFE HFWKKGEDLD LTALITSIQS PPMRQVGVFD VNTFYPEKER FELAMAFNTL IASPSFQSWL SGDPLDIDRM LYTAEGKPRH SIFYLAHLSE SERMFFVTLL LENVLTWTRA QSGTSSLRAL LYFDEVFGYL PPVAEPSSKR PLLTLLKQAR AFGLGCVLVT QNPVDLDYKG LTNTGTWFIG KLQAERDKQR VLEGLKSAIA EAGGSGGSVD YDSIISQLGN RVFLLHNVHE DRPVVFQTRW AMSYLSGPMT RPQIKRLMAP RKAAAEPKPS VSPAPASDAV TLPPMAFAKE DLSGGDGTAL PYGFTATPPG LDPSVKQLFV PVAIDARAAL ENYARQTGSM PVVSARQLVY EPVVIGSASV AFSDRKRGIN ENLRLVVAAV ASASMSGAAS WDESEKLAAG QEHLSVLPDN RAAAFASLPD NLSTSRNLSA CGQPFADWLY YHSRFQLTVH PGSGLFRRSG ESEREFSIRL QQAAREKRDQ EVDALERKYA PQLERIREKI RREERELAQD EAEHQSRKTS ELVGLGESVL GFFLGRKSTR GIGTAITRRR MTSNAKADIE ESHDTIAELK KEQETVGAEM QALVHEISAK WEHPEAELTS EELAPRRGDV TVNFVGLGWL PFWRLTIAAP EGLTTVSVPG YELAETIEK
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