Gene Clim_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1234 
Symbol 
ID6355335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1332509 
End bp1333294 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID642668850 
Producthypothetical protein 
Protein accessionYP_001943280 
Protein GI189346751 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA TCATCGACAT TTCAACCGGC AAACTGCTGC TTGCGTTTGT ATTCATCATC 
GCTGCACAAG CCAGTTCGCT CTTTTACCAT CTCGGGCTTC ACCGGGACAT TGCCCTCGGA
GCCCTGCGAA CCTTCGCGCA GCTCTTTTTG ATGGGTTATG TACTTACCTA CATTCTCGGT
TCAGATAATT TTCTGCTCAC CATTGCAATA TTTGCCGTCA TGGTGATTTC AGCCATGTTC
ATCATAAAGG GTCGGGTGAA GGAAAAGCAG ATAGCCTACA TTCTGCCTAC CTTTCTGACC
ATGCTCATCA CCTATTTCGC GACGGCGGTT TTTGTTTCCG GCATGATAGT GGGCACCACG
CCATGGTGGG AACCGCGATA TTTCATTCCG ACCGGAGGCA TGGTCATCGG AAATTCCATG
TCGGCAATCG CCATCGCTCT TGAGCGGCTG TTCGGCGAGA TGCGCCAGCA AAGGGAGGTG
GTGGAGATGA AGCTCGCCCT TGGTGCCGAC TACCGGGAAG CGAGCAGCGA TGTTTTCAGA
AACGCGGTCA CGGCGGGCAT GATTCCTTCC ATCAACGCCA TGATGGGGGT CGGACTGGTG
TTCATTCCGG GCATGATGTC GGGTCAGATA CTTTCCGGCA CCGACCCTCT TATCGCCATC
CGCTACCAGA TTGTCGTAAT GTTCATGCTG GTTGGTTCGA CCGCCGTTAC CTCACTTGTC
GTCATGCTGA TTGTACGCAG GCGGTGTTTC GGCGTCGGGG AGGAGCTGCT ACTTTCTCCC
CGGTGA
 
Protein sequence
MNQIIDISTG KLLLAFVFII AAQASSLFYH LGLHRDIALG ALRTFAQLFL MGYVLTYILG 
SDNFLLTIAI FAVMVISAMF IIKGRVKEKQ IAYILPTFLT MLITYFATAV FVSGMIVGTT
PWWEPRYFIP TGGMVIGNSM SAIAIALERL FGEMRQQREV VEMKLALGAD YREASSDVFR
NAVTAGMIPS INAMMGVGLV FIPGMMSGQI LSGTDPLIAI RYQIVVMFML VGSTAVTSLV
VMLIVRRRCF GVGEELLLSP R