Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1234 |
Symbol | |
ID | 6355335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1332509 |
End bp | 1333294 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642668850 |
Product | hypothetical protein |
Protein accession | YP_001943280 |
Protein GI | 189346751 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGA TCATCGACAT TTCAACCGGC AAACTGCTGC TTGCGTTTGT ATTCATCATC GCTGCACAAG CCAGTTCGCT CTTTTACCAT CTCGGGCTTC ACCGGGACAT TGCCCTCGGA GCCCTGCGAA CCTTCGCGCA GCTCTTTTTG ATGGGTTATG TACTTACCTA CATTCTCGGT TCAGATAATT TTCTGCTCAC CATTGCAATA TTTGCCGTCA TGGTGATTTC AGCCATGTTC ATCATAAAGG GTCGGGTGAA GGAAAAGCAG ATAGCCTACA TTCTGCCTAC CTTTCTGACC ATGCTCATCA CCTATTTCGC GACGGCGGTT TTTGTTTCCG GCATGATAGT GGGCACCACG CCATGGTGGG AACCGCGATA TTTCATTCCG ACCGGAGGCA TGGTCATCGG AAATTCCATG TCGGCAATCG CCATCGCTCT TGAGCGGCTG TTCGGCGAGA TGCGCCAGCA AAGGGAGGTG GTGGAGATGA AGCTCGCCCT TGGTGCCGAC TACCGGGAAG CGAGCAGCGA TGTTTTCAGA AACGCGGTCA CGGCGGGCAT GATTCCTTCC ATCAACGCCA TGATGGGGGT CGGACTGGTG TTCATTCCGG GCATGATGTC GGGTCAGATA CTTTCCGGCA CCGACCCTCT TATCGCCATC CGCTACCAGA TTGTCGTAAT GTTCATGCTG GTTGGTTCGA CCGCCGTTAC CTCACTTGTC GTCATGCTGA TTGTACGCAG GCGGTGTTTC GGCGTCGGGG AGGAGCTGCT ACTTTCTCCC CGGTGA
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Protein sequence | MNQIIDISTG KLLLAFVFII AAQASSLFYH LGLHRDIALG ALRTFAQLFL MGYVLTYILG SDNFLLTIAI FAVMVISAMF IIKGRVKEKQ IAYILPTFLT MLITYFATAV FVSGMIVGTT PWWEPRYFIP TGGMVIGNSM SAIAIALERL FGEMRQQREV VEMKLALGAD YREASSDVFR NAVTAGMIPS INAMMGVGLV FIPGMMSGQI LSGTDPLIAI RYQIVVMFML VGSTAVTSLV VMLIVRRRCF GVGEELLLSP R
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