| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1228 |
|---|
| Symbol | |
|---|
| ID | 6355329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1324430 |
|---|
| End bp | 1325377 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642668844 |
|---|
| Product | protein of unknown function DUF477 |
|---|
| Protein accession | YP_001943274 |
|---|
| Protein GI | 189346745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAA GACCGATGTT CCTGTTGCTC CCGATTATCA TGTTCATCAG TTCAATACTG
TTTGCTGCAG ATGTTCCTTA TCTGAGCGGG AGAATCACGG ATAATGCACA GCTTCTGTCG
CCGGAGCTCA ACCGGTCGTT GTCGGACAGC CTGCAGGCAC ATGAAAAGCG CACCGGCAAC
CAGATTGCCG TTCTGACGAT TGCCACACTC GATGGTGAGA GCATCGAAGA TTACGCAGTC
AGGGTGTTCG AGTCATGGAA ACTTGGTCAG AAAGGCAGGG ATAATGGTGT TCTGATCGTG
GTGGTTCCCG ACGACCGGCG GATGCGCATC GAAGTGGGGT ACGGCCTTGA AGGAACGCTC
ACCGATGTCA TGGCGGGACG GATCGTTCAA AACGTTATGA CCCCTAAATT CAAAAACGGA
GATTTTGGCG ACGGTATTGC CGATGGGGTC CGGGCAGTGA TTGAGGTTCT TGAGGGCGGC
GAATTGCCGG ATACAGGCGT TACAACCGGT TCGACGGAAA AGTCGAATTT CTTTGAAATG
GAGGGGCCGG AGCTTTCGAT TCAGGAGCGT ATTCTTATGG GAGCGTTTAT TTTCGGAATC
ATCGGACTGT TTACCGCAAT CGGGATAATG ACGCCGGGTG TCGGATGGTT TTTATACCTT
TTTCTGATTC CCTTCTGGGC GGTTTTTCCG ATTGTTGTCC TTGGGTCAGG TGCTGCGTTC
TATTGTTTTA TCGCCTATGT GATAGGTTTC CCGGTTACAA AACTTTTCAT ACGAAAGACC
GACTGGTATA AAAAGGCTCA AAAAGAACTG CGAACCAAGG GGCAGACTTC AATTGGCGGC
TTTTCGATCG GTTCCGGCAG TTCCGGTTCA TCCTGGTCTT CAGGCGGGTC AGGTTTTTCG
GGAGGTGGAG GATCATCGGG TGGAGGCGGT GCCTCCGGCA GTTGGTAG
|
|---|
| Protein sequence | MKARPMFLLL PIIMFISSIL FAADVPYLSG RITDNAQLLS PELNRSLSDS LQAHEKRTGN
QIAVLTIATL DGESIEDYAV RVFESWKLGQ KGRDNGVLIV VVPDDRRMRI EVGYGLEGTL
TDVMAGRIVQ NVMTPKFKNG DFGDGIADGV RAVIEVLEGG ELPDTGVTTG STEKSNFFEM
EGPELSIQER ILMGAFIFGI IGLFTAIGIM TPGVGWFLYL FLIPFWAVFP IVVLGSGAAF
YCFIAYVIGF PVTKLFIRKT DWYKKAQKEL RTKGQTSIGG FSIGSGSSGS SWSSGGSGFS
GGGGSSGGGG ASGSW
|
|---|
| |