Gene Clim_1217 details

Gene Information

• Locus tag: Clim_1217
• ID: 6355318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1314102
• End bp: 1316126
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642668833
• Product: carboxyl-terminal protease
• Protein accession: YP_001943263
• Protein GI: 189346734
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0793] Periplasmic protease
• TIGRFAM ID: [TIGR00225] C-terminal peptidase (prc)

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGGCA AAAGCCTGCT CTGCATTTTC CTGGCATTTG CAACGGTCAT TCCGGCAGCC 
GCCGGAGCGC CGGCAAAATC CTCTCCCGTT CGAACCGTAA AGCCGCTTGT TCCAACGGCT 
GCACAGGATG AGGCCGGAGT ACATATCAGA CAATTTCTTC TCGACAGGCA CTATAGAAAG 
GTATCGCCGA ACGACTCTCT TTCCGTGGAA ATTTTCAATC GCTATATCGA CATTCTTGAC 
GGAAGACGCA GCTATTTCAT TGCCGGAGAA GTCGATAGCC TGAGGCAGCT TTACGGAAAC 
CGGCTCGATG ACGAATTCCT TGCCGGCAAA GCCGACGCCG GATTTGCCAT ATATAACTTG 
TTTGTAAGGC GGGCCGGCGA GAAGGTGCTC TTCATGAAAA ATACCGCCAA TACGGTAAAG 
TTCAATTTTA CCGTTCCCGA TACCCTCGAT CTCGATCGCA AGACCGATCC GTGGCCTGGA 
GACCGGAAGC AATTGACCGA TTTGTGGACA AAAGAGTTGA AGTACCAGTG GCTCGACCTG 
AAATCGTCGG GGAAACGTGA ACGGAGCATA CGCGCAGAGC TCGTAAAGAA CCTTGCCGGC 
AGACTCAATC TTCTGAACCG CCAGAAACCG GAAGATGCTT TCCATGCCTA TATGTCGGCG 
CTGACCACAT CGTTTGATCC GCATACCAGT TATTTTTCGC ACGATGAGTT CGAAAACTTT 
CAGATCGGTC TGAGCCGTTC GCTCGAGGGT ATAGGAGCCA GGCTGCAGAG TGAAAACGAC 
TATATCGTCG TCAATGAGGT TATTCCCGGA GGCCCGGCAT TTAAAAGCCG TGTTCTGAAA 
AAAGGCGATA AAATTATTGG CGTCGGGCAG GGCAAGACGT CGGAAATTAT TGATATAACC 
GGATGGAGGA TCAACGACGC CGTTGGACTG ATACGCGGCA AGAAAGGTTC GATCGTCCGT 
CTGAAAGTCC TGCCGGCAAG CCAGGCAGGC AGAGGCGCGG CAAAAATCAT TCAGCTCGTA 
CGCGACAAAA TCAACCTTGA AGAGGAAGCC GCGAGTAAAG AGGTTATCCG GATAAACGGA 
CGCAAAATCG GTATTATCGC CATTCCGTCA TTCTATCTTG ATTTTACTGC CCAGAAAAAC 
AAGGAAGGCA ATTTCAACAG CACAAGCCGC GATGTCCTGA GAATTCTCGG CGAGCTCAAT 
GCGGAGGGCG TGGACGGCAT TGTTCTCGAT CTTCGGGATA ACGGCGGCGG TTCACTTGAA 
GAGGCGGTAA ACGTTACCGG CCTGTTCATT CCTCAGGGTC CGGTTGTGCA GATCAGCAGC 
GCATCGGGAA GAACGGTTGT TCTCGGCGAC AAGGACGTTC GTGTGCTCTA CGGCGGCCCT 
CTTGCGGTGC TGGTCAACCG TTACAGCGCC TCGGCTTCGG AAATCGTGGC GGCGGCAATC 
CAGGATTACG GAAGAGGGGT GATTATCGGA GAGAGAACGT TCGGAAAAGG AACGGTTCAA 
AGTCTCGTCA ATCTCCCGGA TCCTTCCGTT TCGACTTCGG GCGGCTCCGG ACTTGGAGAG 
ATCAAGCTCA CGATGGCAAA ATTTTACCGG ATTTCCGGTG GCAGCACCCA GCACAAGGGG 
GTTGAACCGG ATATCTTCAT GCCCTCGATG ATCGATATCG CCACTATCGG CGAAGATACC 
TATACCAGCA GTCTGCCGTG GACGACGATT CCGCCTTCGA TGTATCAGAT AACCGGGGAG 
ATAACGCCCG AAACAGTAGC ATTTCTCAGG CAAAGAGAGC GTGATCGCTC ATCAGGGAAT 
CTGCAGTATC AGGATTATCT GCGCGATCTT GCCACCCTTG ACCGTATTCG GAAGAAAAAG 
GGTATTGTGC TGCAGGATGC GGCTTTCAAA TCGGAAGCGG AAGAAATCAA AAAGATCGAA 
AAAAAGTGGA GCGCCGACCG GGAGGCACCG AAGAGTTCCC TGAACGATGT ACTGCTGACC 
GAATCGGCTT CGGTTGTCGT CGATCTTGAA GAGCGTGCCC GCTGA 

 

Protein sequence

MLGKSLLCIF LAFATVIPAA AGAPAKSSPV RTVKPLVPTA AQDEAGVHIR QFLLDRHYRK 
VSPNDSLSVE IFNRYIDILD GRRSYFIAGE VDSLRQLYGN RLDDEFLAGK ADAGFAIYNL 
FVRRAGEKVL FMKNTANTVK FNFTVPDTLD LDRKTDPWPG DRKQLTDLWT KELKYQWLDL 
KSSGKRERSI RAELVKNLAG RLNLLNRQKP EDAFHAYMSA LTTSFDPHTS YFSHDEFENF 
QIGLSRSLEG IGARLQSEND YIVVNEVIPG GPAFKSRVLK KGDKIIGVGQ GKTSEIIDIT 
GWRINDAVGL IRGKKGSIVR LKVLPASQAG RGAAKIIQLV RDKINLEEEA ASKEVIRING 
RKIGIIAIPS FYLDFTAQKN KEGNFNSTSR DVLRILGELN AEGVDGIVLD LRDNGGGSLE 
EAVNVTGLFI PQGPVVQISS ASGRTVVLGD KDVRVLYGGP LAVLVNRYSA SASEIVAAAI 
QDYGRGVIIG ERTFGKGTVQ SLVNLPDPSV STSGGSGLGE IKLTMAKFYR ISGGSTQHKG 
VEPDIFMPSM IDIATIGEDT YTSSLPWTTI PPSMYQITGE ITPETVAFLR QRERDRSSGN 
LQYQDYLRDL ATLDRIRKKK GIVLQDAAFK SEAEEIKKIE KKWSADREAP KSSLNDVLLT 
ESASVVVDLE ERAR