Gene Clim_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1198 
Symbol 
ID6353715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1291768 
End bp1292601 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content51% 
IMG OID642668814 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001943244 
Protein GI189346715 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.94097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAC TGGAACAGTA CAGAAAAAAA GCCGCAGAAC TGCTTTCATC AGGCGAAGTA 
AAACTTGTGA TCGGATATGG AGCGGGCTCC ACACCCGACA GACGAAGGGC TCTGTTTGCC
CGGACAACCG ACGATGCCGC AAGACTCCAT GTCGACGCGG CATGCGACGC AAACCTTTCG
GGATATCTTG TGACCGAAGG CCTTCTGAGC GACAAAAAGA AAGTCGGAAT TTTTCTGAGG
CCCGAGGGAA TCAGAAGCGT CAATATCCTT GCCGCAGAAT CCCAGCTCGA TCCCGATCAG
ATTGTCATTC TCGGTTTTAC TGAAGAAAAC GGGACCGTAA GCGCTCTGCA AGGCACTCAG
GCAAGTGACT TTACCTCCCT GATGACAGCC CTGAAGGATA ACAGGACAAC GTCCGTAAAA
GAACAGGAGC TGGTCGAAAA AATCGAAGCC ATGACCCCTC AGGAGCGCTT TGCCTTCTGG
CAGGCGGAAT TCGAAAAATG CATCAAATGC TATGCGTGCC GTCAGGTCTG CCCGATGTGT
TACTGCAAAA GATGCATCGT CGATAACAAT CAGCCGCAAT GGGTTCATAC TTCCTCTCAC
ACCCTTGGAA ATTTCGAATG GAACCTTGTC AGAGCCTTCC ACCTTTCAGG CCGCTGTGTT
GAATGCGGCG GATGTGACCG GGCCTGTCCG GTCAATATTC CTCTCCGTCT CATAAACCGG
AGAATGGCCA ATGAGGTACT CGATGCATTC GACCATTTCT CAGGCATGAA CCAGAACCAG
GAACCAGTGC TGGCAAGTTT CAAAAAGGAC GATCCCGAGA CCTTTATCCT CTAA
 
Protein sequence
MSILEQYRKK AAELLSSGEV KLVIGYGAGS TPDRRRALFA RTTDDAARLH VDAACDANLS 
GYLVTEGLLS DKKKVGIFLR PEGIRSVNIL AAESQLDPDQ IVILGFTEEN GTVSALQGTQ
ASDFTSLMTA LKDNRTTSVK EQELVEKIEA MTPQERFAFW QAEFEKCIKC YACRQVCPMC
YCKRCIVDNN QPQWVHTSSH TLGNFEWNLV RAFHLSGRCV ECGGCDRACP VNIPLRLINR
RMANEVLDAF DHFSGMNQNQ EPVLASFKKD DPETFIL