Gene Clim_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1171 
Symbol 
ID6353687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1264562 
End bp1265398 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content47% 
IMG OID642668787 
Productalpha/beta hydrolase fold 
Protein accessionYP_001943218 
Protein GI189346689 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000278776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCATT ACAAGACATA TGAACTTCCC GACACCGATG CTCCATGGGT TGTGTTTGTG 
CACGGGGCCG GCGGCAGTTC TTCTATCTGG TTTCTGCAGA TCAAGGAGTT TATCAAGCAT
TTCAATGTTC TGCTTGTCGA TCTGAGAGGA CATGGCAAAT CAAAGCATAT CGTAACCTTC
AAAGAGGACC GGCACTACAA TTTCGAGGAT ATCACCCGTG ACATCATCGA AGTTCTTGAT
GAGTTGCATA TTGATAAAGC TCATTTTATA GGGATTTCTC TGGGGACTAT CCTGATTCGT
AATATGAGCG AAATCGCACC TGATCGCGTC AGTTCAATGA TTATGGGTGG TGCGATCATC
AGGCTGAATA TAAGGGCAAA AGTGCTTGTA ACCCTTGGAA ACATGTTTAA GCGGGTTGTG
CCTTATATGT GGCTCTACAG TTTTTTCGCC TGGATTATCA TGCCTCGCGA GCGGCATAAG
AAGTCGCGTC TGCTGTTTGT GAACGAGGCG AAGAAGGTTG CTCAGAAGGA GTTCATGCGC
TGGTTCAGGC TGACCTACGA GCTTACTCCG CTCCTGAAGT ATTTTGAGGA GAAGGATACA
GGTATTCCTA CGCTTTACCT GATGGGTGAG GAAGATCATA TGTTTCTGCC TGCGGTTCGT
CTGATCATTA CCCGCCATAC GAATTCATGG CTTGAGGTTA TCAGTGATTC CGGACATGTA
TGCAATGTCG ATCAGCCTCG GGAGTTCAAC TCTCGCGCTA TTGCCTTTGT CAAAAAGATG
GATACCATTT CGGCAAGAGA GTGCGAAGCG GGATTGCCTC AACTTGCGGT CTGTTAG
 
Protein sequence
MLHYKTYELP DTDAPWVVFV HGAGGSSSIW FLQIKEFIKH FNVLLVDLRG HGKSKHIVTF 
KEDRHYNFED ITRDIIEVLD ELHIDKAHFI GISLGTILIR NMSEIAPDRV SSMIMGGAII
RLNIRAKVLV TLGNMFKRVV PYMWLYSFFA WIIMPRERHK KSRLLFVNEA KKVAQKEFMR
WFRLTYELTP LLKYFEEKDT GIPTLYLMGE EDHMFLPAVR LIITRHTNSW LEVISDSGHV
CNVDQPREFN SRAIAFVKKM DTISARECEA GLPQLAVC