| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1167 |
|---|
| Symbol | |
|---|
| ID | 6353683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1261160 |
|---|
| End bp | 1262176 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642668783 |
|---|
| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| Protein accession | YP_001943214 |
|---|
| Protein GI | 189346685 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000444503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTA TAACCGGAGG AGCCGGATTT ATCGGCAGCG CCTTGCTCTG GGAGCTCAAT
ATGCAGGGTC GCCAGGATAT TGTCGTCGTC GACACTCTTG GCTCTACTGC TACCGGACAG
TGGCGGAATC TTTCCGGCCT CAGCTTTGCG GACTTCATCC CCAGGGATAA TTTTCTCCCG
CTCCTCGAAA GCGGAGCATT TACCGGCATA ACAGCTGTCA TTCATATGGG CGCTATCAGC
GCCACAACAG AAACCGATGC AGATCTGCTC ATCGAGCGAA ATTTCGCTTA CTCCAAAAGC
ATAGCGGCAT ACTGCATGAA AAAAAACATC CGGCTGATCT ATGCCTCAAG CGCCGCGACT
TATGGTGACG GGACAGCCGG CTACGAAGAC GATGAAACCA GAATCGACAG CCTTCGTCCG
CTTAATATGT ACGGCTACTC AAAGCAACTG TTCGACCGAT GGGCGCTGAA ACAAGGCATT
CTCGAACATG CCGCAGGTCT GAAATTCTTC AATGTGTACG GACCGAACGA ATATCACAAA
AGCGATATGA CCAGCGTCGT CTATAAAGCC TTCAATCAGA TAAGGGAAAA TGGACAGGTT
AGTCTATTCA AGTCACACCG GCCCGATTAC CATGACGGCG AACAGATGCG CGATTTCGTC
TACATACGTG ACTGTACCGC AATCATGATC TGGCTGCTCG ATCATCCGGA CATATCCGGC
ATTTTCAACA TCGGAAGCGG AGAGGCAAGA AGTTTCAACG ATCTTGTCAA TGCAACGTTT
GCCGCACTGA ATCTGAAACC CGCGATCAAT TATGTACCGA TGCCCGAGCA CCTCCAGGGG
CGTTACCAGT ATCACACACG TGCTGAAATG GCAAAGCTGC GTACTGCAGG ATTTCACAAG
CCTATGACCC CTCTCGAAGA AGGCGTGGGC GACTATGTAC GCAACTATCT TGACGCCGAA
ACGCCTTATT ACGACCTGCA GAGCATACAT AAAAAGATTA ATCACAAGGA CTTTTGA
|
|---|
| Protein sequence | MIIITGGAGF IGSALLWELN MQGRQDIVVV DTLGSTATGQ WRNLSGLSFA DFIPRDNFLP
LLESGAFTGI TAVIHMGAIS ATTETDADLL IERNFAYSKS IAAYCMKKNI RLIYASSAAT
YGDGTAGYED DETRIDSLRP LNMYGYSKQL FDRWALKQGI LEHAAGLKFF NVYGPNEYHK
SDMTSVVYKA FNQIRENGQV SLFKSHRPDY HDGEQMRDFV YIRDCTAIMI WLLDHPDISG
IFNIGSGEAR SFNDLVNATF AALNLKPAIN YVPMPEHLQG RYQYHTRAEM AKLRTAGFHK
PMTPLEEGVG DYVRNYLDAE TPYYDLQSIH KKINHKDF
|
|---|
| |