Gene Clim_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1160 
Symbol 
ID6353676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1254564 
End bp1255187 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content54% 
IMG OID642668777 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001943208 
Protein GI189346679 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000397574 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA TGAATAATCT CCTCCTTTTT TTTGCTGCGT CGGCGCTTCT TGCGCTTTCT 
CCAGGTCCAG ACAACCTTTT TGTGATGGCG CAGTCGGTGC AGAACGGCCG TGTCGCGGGG 
CTGCTTGTAA CGCTTGGGCT CTCTACTGGT CTTGTCGCGC ATACGATTGC CGTCGTTTTC 
GGATTGGCCG CCCTTGTGAA GGCTTCGGCG ATTGCGTTTA CGGCATTGAA GTTTATCGGC 
GCGGCGTATC TGCTCTATCT TGCATGGAAG GCGTTCCGTT CAGGCGCTTC AGCACGATCC 
GGAAGTTCCG GTACGGTTGA TAGCGTGAGG CTCTACCGGA GGGGAATTAT CATGAACCTT 
TCCAACCCGA AGGTGTCGCT TTTCTTTCTT GCTTTTCTTC CCCAGTTCGC CGATCCTGCC 
CGAGGGCCTG TTGTTCCTCA GCTGATGCTG CTTGGTCTGG TGTTCATTGC CGCAACAATG 
CTGGTATTCG GCATGCTCAG TATTCTTGCC GCCGGAGCGG GGGAGAGATT GCGCCGATCG 
GAAACCGCAC AACAGATTAT TAACCGGATT GCCGGTACGG TTTTTGCCGC ACTTGCCGTA 
AAGCTGGCTC TGACTGAACG ATAA
 
Protein sequence
MPEMNNLLLF FAASALLALS PGPDNLFVMA QSVQNGRVAG LLVTLGLSTG LVAHTIAVVF 
GLAALVKASA IAFTALKFIG AAYLLYLAWK AFRSGASARS GSSGTVDSVR LYRRGIIMNL 
SNPKVSLFFL AFLPQFADPA RGPVVPQLML LGLVFIAATM LVFGMLSILA AGAGERLRRS 
ETAQQIINRI AGTVFAALAV KLALTER