Gene Clim_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1158 
Symbol 
ID6353674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1253610 
End bp1254101 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content53% 
IMG OID642668775 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001943206 
Protein GI189346677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000802004 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATCG TGCTCGAACC GCTGGCCGTA AGCGACGGCC CTGAAGTGCT TGATATTTTC 
AATTTTTATG CCGATCGCAG TTTTGCGGCT TACTCTCTTA AGCCGTTAAG CGATGAAATG 
GCATCTATGT TTCTGGAGCT TTCGAACGGG TATCCTGCGT TTGTTGCCCG CGACGAGAAC 
GGCAAGGCTG TCGGGTTCGG CATGTTGCGT CCATACAGCC CTATGCCTGC TTTTGCCGGC 
ACTGCCGAGA TAACGCTTTT TCTGAGAGAC GGGTATACCG GCCAGGGGAT AGGGAAGGTG 
ATTCTGGACC ATCTTGTGGA ACAGGCTGCC GAAATGGGGC TTGTTTCAAT TCTTGCGAGC 
ATCAGTTCGC TGAACGAGGG GAGTATACGG TTTCATCTGC GGAACGGGTT TCAGGAGTGC 
GGGAGGTTCA GGGATGCGGG CGAGAAGCTC GGGAGGAAGT TCGATGTGGT TTATTGTCAG 
AGGATGGTTT AA
 
Protein sequence
MHIVLEPLAV SDGPEVLDIF NFYADRSFAA YSLKPLSDEM ASMFLELSNG YPAFVARDEN 
GKAVGFGMLR PYSPMPAFAG TAEITLFLRD GYTGQGIGKV ILDHLVEQAA EMGLVSILAS 
ISSLNEGSIR FHLRNGFQEC GRFRDAGEKL GRKFDVVYCQ RMV