Gene Clim_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1124 
Symbol 
ID6355766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1227564 
End bp1228427 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content58% 
IMG OID642668741 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 
Protein accessionYP_001943172 
Protein GI189346643 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA CGCAAACCCG GTTCGACATG CCTCCGCATA CCGATGTGGC CTGGTGCCCC 
GGATGCGGCA ACCATATGCT GCTCACGGCG GTCAAAGGAG CCCTCGACGA TCTCGGCATC
GATCCCCGGC AGCTCGTAAT GGTCTCGGGC ATCGGGCAGG CAGCCAAGGC GCCGCAGTAC
ATCAATGCCA ACATGTTTAA CGGTCTGCAT GGCAGGGCGC TTCCTGCCGC GCTCGGCATA
AGGCTATCGA ACCGCAACCT CGTGGTTGTG GTGGAGTCGG GAGACGGCGA CATGTACGGA
GAGGGGGGCA ACCATTTTCT GCACGCCATT CGCCGGAATT TCGATGTCAC GATGATCATC
CACAACAACA TGGTTTACGG TCTCACCAAG GGGCAGGCCT CTCCTACCTC GCCCATCGGG
ATGCGCACTC CCGTTCAGGT AAAAGGGGTT ATACCGGAGC CGTTCAACCC GCTTGCCGTG
GCCATCGCTC TCGATGCGCC TTTTGTGGCG AGGGCCTTCG CAGGGGATAT TGCGCAGACC
CGTTCACTCA TCGCTGAAGC CATACGGTTC AGGGGATGCT CCATCGTTGA CGTGTTCCAG
CCTTGCGTTA TCTTCAACAA GCTGAACACT TACCAGTGGT TCAGGGAACA TACCTGCAGC
ATGCCCGAAG ATCACAATCC CGAAGACCGC ATAGCAGCAT TCGCCCTCGC CATACAGCAC
GAACCGTTGC CGCTCGGTAT TTTCTACCGT AACGGAACTC GGGCGCTCTA CGAGGATCAG
GCCGGCATTA CGGAAACTCC GCTTTACAGG CAGCCTCCCC CGGGAGAGGA GGCATTCGAA
AAGCTGATCG ATGCATACCG GTAA
 
Protein sequence
MSDTQTRFDM PPHTDVAWCP GCGNHMLLTA VKGALDDLGI DPRQLVMVSG IGQAAKAPQY 
INANMFNGLH GRALPAALGI RLSNRNLVVV VESGDGDMYG EGGNHFLHAI RRNFDVTMII
HNNMVYGLTK GQASPTSPIG MRTPVQVKGV IPEPFNPLAV AIALDAPFVA RAFAGDIAQT
RSLIAEAIRF RGCSIVDVFQ PCVIFNKLNT YQWFREHTCS MPEDHNPEDR IAAFALAIQH
EPLPLGIFYR NGTRALYEDQ AGITETPLYR QPPPGEEAFE KLIDAYR