Gene Clim_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1119 
Symbol 
ID6355761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1220499 
End bp1220960 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID642668736 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001943167 
Protein GI189346638 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACTC TTTCGATTCT CGTACTGAAC GGGCCGAACC TCTCGAGACT CGGCAAGCGC 
GAACCGGAAA TTTACGGTAC GCTCACACTC GACGATATCA ATCGGGGGCT TGCCGAAAGC 
TTTCCGGAGG TTGCCTTCGA TTTCTTCCAG TCTGAAGACG AAGGTGTTTT GATCGAAAAG 
CTTTTTCAGG CTGAGGACAA CGGCAGCTGC AGCGGAGTTG TGCTCAACGC CGGGGCGCTC 
ACGCACTACT CCATAGCTCT TCGTGACGCC ATCAGCGCCA TAAAGCTGCC GGTCGTGGAA 
GTGCATCTCT CCAATATCTA TGCCCGCGAG GAGTTCCGTC GCACCTCGGT GATCTCTGAA 
GTCTGCAGGG GAGTCATCAG CGGCTTCGGC GTAACCAGCT ATCATCTCGG TGTCAGGGCG 
ATTCTTGAAT GCGTGCAGGA AAAGGACGTG CCGAGCGATT AA
 
Protein sequence
MGTLSILVLN GPNLSRLGKR EPEIYGTLTL DDINRGLAES FPEVAFDFFQ SEDEGVLIEK 
LFQAEDNGSC SGVVLNAGAL THYSIALRDA ISAIKLPVVE VHLSNIYARE EFRRTSVISE 
VCRGVISGFG VTSYHLGVRA ILECVQEKDV PSD