| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1108 |
|---|
| Symbol | |
|---|
| ID | 6355750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1208949 |
|---|
| End bp | 1210307 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642668725 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001943156 |
|---|
| Protein GI | 189346627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCTG CTGTACGGTT AACCGGGATC ACAAAAAAAT TCGGTTCTGC CGAAGCGAAC
AGAAATGTTT CGCTCTCGAT CATGCAAGGC ACCATTCATG CCATTGTTGG CGAGAACGGC
GCAGGCAAAA GCACGCTTGC CAAAATCATC TACGGCATGT ACCGGCCCGA CGGCGGAACC
ATGGAGGTTC ACGGAAAAAC CGTAGTATTT GCCTCGTCCA GAGATGCAAT AGCAGCAGGA
ATCGGTATGG TGCATCAGCA TTTTATGCTT GTGCCGACGC TCACGGTAGC AGAAAACATC
ATACTCGGGC TTGAAAAAAA GCGCCTTTTT TCGCCGCTCG CACTGAAAAA CAGAGGCGAT
ATCATCCGGA AGCTCTCCCG ACAATATGAT TTTACTGTCG ATCCGGACGC TTTGGTCGCT
ACGCTTTCGG TGGGAGAAGA ACAGCGAGTG GAAATTATCA AGTTGCTCTA CCGGAACGCC
GGTATTCTCA TTCTTGACGA ACCGACAGCC GTACTCACCC CCCAGGAGAC CGATACCCTT
TTTACGGTTC TGCGATCTCT CTGCAGAGCG GGAAAAACCA TTCTGATCAT TACCCACAAG
CTTGACGAGG TGCTTGCCGT TGCCGACACG GTCAGTGTCA TGAAGCAGGG AAAGGTAACG
GGAACTCTTC CATGCAGAGC GACCACCAAG GAGGAGCTTG CCCGGATGAT GGTTGGTCGC
AGCGTACTGC TCAGGGTTGA AAACCCTGTG CCTTCTCCCG GAAAAACCAT ACTGTCTGTG
AAAAACCTCA GTTTCAGGAC GGATGACGGA CGTTATAAAC TGCAGGAGCT GAACTTTTCA
ATCCGTGCCG GAGAGATTTT CGGAATTGCA GGCGTCGAGG GAAACGGCCA GAGCGAGCTG
CTTTCACTGC TGTGGGGAGT GAACCTGAAA AGCGGAACGG TTTCAGGAAA AATCATGCTC
GAAGAAACCG ATATAACCGG TAAAAACCCT GCTGAAATTG CGGCACTCGG CGTCTCGCTC
GTCCCCGAAG ATCGCCTGAA ACATGCCGTT ATAACCGCTT ACAGCGTTGC GGAAAACATG
CTGTTCGGCC GTCATCGGGA AACTCTGTTC CACAACAGGT CGGGATTCAA CCGGAAGTCC
GTCAACGAAC ATGCCAAAAA ACTGAGTGAA ACCTATGATG TGCGATGCCG GGATCTATAT
AGCCAGGCAA GACGTGCGAC AAGGGAAGAG GTTACCGCGG CAAACATGAT GGGAAGCACG
ATTTCGTACT GCCCGGTAAT TTCAAACAGA ATAAGAATAA CGGTCAGAGG AGCGCGCATG
ATGCCCGCAG TAAGAGCGCC CATGCCTACG AGCGCATAA
|
|---|
| Protein sequence | MEPAVRLTGI TKKFGSAEAN RNVSLSIMQG TIHAIVGENG AGKSTLAKII YGMYRPDGGT
MEVHGKTVVF ASSRDAIAAG IGMVHQHFML VPTLTVAENI ILGLEKKRLF SPLALKNRGD
IIRKLSRQYD FTVDPDALVA TLSVGEEQRV EIIKLLYRNA GILILDEPTA VLTPQETDTL
FTVLRSLCRA GKTILIITHK LDEVLAVADT VSVMKQGKVT GTLPCRATTK EELARMMVGR
SVLLRVENPV PSPGKTILSV KNLSFRTDDG RYKLQELNFS IRAGEIFGIA GVEGNGQSEL
LSLLWGVNLK SGTVSGKIML EETDITGKNP AEIAALGVSL VPEDRLKHAV ITAYSVAENM
LFGRHRETLF HNRSGFNRKS VNEHAKKLSE TYDVRCRDLY SQARRATREE VTAANMMGST
ISYCPVISNR IRITVRGARM MPAVRAPMPT SA
|
|---|
| |