Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1104 |
Symbol | |
ID | 6355746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1206281 |
End bp | 1207015 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642668721 |
Product | PASTA domain containing protein |
Protein accession | YP_001943152 |
Protein GI | 189346623 |
COG category | [S] Function unknown |
COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG CCGGATTGAT GGTTCTTGCC GTTTTTGCCT TGCTTGTTGT TTTCGACAGG ATTCTCATGC CGCTCTATAT TGCTCAGGGA CAGCATAAAA CCGTTCCCGA GGTTAGCGGC ATGGATTATG ATGACGCTGT AAGAGTGCTC AGGGATGCAG GACTCGATGC CAGGAAAAGC TATCATGTGA AATATCTCAG CAGGATAGAT TCCAATATCG TAATCTCTCA GACTCCGGTA GCCGGTTCTC TGGTAAAACC GGGCAGAACG GTTTATCTCG TCGTAAACCG TCAGGAAAAA CCGAGTTTTC AGATGCCGGA TCTTTATGGT CGTCCGGAGT TCGATGTTCG TCAGACGCTT GCCCGTCTTG ATCTGTCTAT CGATAATGTG CAGATAAGTA CCGTTACCAC TCCGGAGGAA GACGGCAGAG TCATCAGCCA GTCCATTCCA GCTCAAACCA TGGTAAAATC GGGAGCGTCT GTTTCGATTA TTGTCGGGAA ACTCGAGATT GAAGCAGAGG GGCTTCGCAA GATTGCCGTT CCCGATGTGC TCGGCATGTC GCTTTCGGAA GCTCAGGAGA CCATGTCCGG CAATGGCCTG TCTACCGGCA GGATCACCTA TGAATATTCA GCGATACTGG TACCGAACAC GGTTATAAGC CAGAAGCCGG GAGCCAATGC GTTTGTCTCT CCCGGCATGC CGGTTGACTT CACGGTCGTA ACGGCTGCGG AGTAG
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Protein sequence | MKKAGLMVLA VFALLVVFDR ILMPLYIAQG QHKTVPEVSG MDYDDAVRVL RDAGLDARKS YHVKYLSRID SNIVISQTPV AGSLVKPGRT VYLVVNRQEK PSFQMPDLYG RPEFDVRQTL ARLDLSIDNV QISTVTTPEE DGRVISQSIP AQTMVKSGAS VSIIVGKLEI EAEGLRKIAV PDVLGMSLSE AQETMSGNGL STGRITYEYS AILVPNTVIS QKPGANAFVS PGMPVDFTVV TAAE
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