Gene Clim_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1104 
Symbol 
ID6355746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1206281 
End bp1207015 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID642668721 
ProductPASTA domain containing protein 
Protein accessionYP_001943152 
Protein GI189346623 
COG category[S] Function unknown 
COG ID[COG2815] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG CCGGATTGAT GGTTCTTGCC GTTTTTGCCT TGCTTGTTGT TTTCGACAGG 
ATTCTCATGC CGCTCTATAT TGCTCAGGGA CAGCATAAAA CCGTTCCCGA GGTTAGCGGC
ATGGATTATG ATGACGCTGT AAGAGTGCTC AGGGATGCAG GACTCGATGC CAGGAAAAGC
TATCATGTGA AATATCTCAG CAGGATAGAT TCCAATATCG TAATCTCTCA GACTCCGGTA
GCCGGTTCTC TGGTAAAACC GGGCAGAACG GTTTATCTCG TCGTAAACCG TCAGGAAAAA
CCGAGTTTTC AGATGCCGGA TCTTTATGGT CGTCCGGAGT TCGATGTTCG TCAGACGCTT
GCCCGTCTTG ATCTGTCTAT CGATAATGTG CAGATAAGTA CCGTTACCAC TCCGGAGGAA
GACGGCAGAG TCATCAGCCA GTCCATTCCA GCTCAAACCA TGGTAAAATC GGGAGCGTCT
GTTTCGATTA TTGTCGGGAA ACTCGAGATT GAAGCAGAGG GGCTTCGCAA GATTGCCGTT
CCCGATGTGC TCGGCATGTC GCTTTCGGAA GCTCAGGAGA CCATGTCCGG CAATGGCCTG
TCTACCGGCA GGATCACCTA TGAATATTCA GCGATACTGG TACCGAACAC GGTTATAAGC
CAGAAGCCGG GAGCCAATGC GTTTGTCTCT CCCGGCATGC CGGTTGACTT CACGGTCGTA
ACGGCTGCGG AGTAG
 
Protein sequence
MKKAGLMVLA VFALLVVFDR ILMPLYIAQG QHKTVPEVSG MDYDDAVRVL RDAGLDARKS 
YHVKYLSRID SNIVISQTPV AGSLVKPGRT VYLVVNRQEK PSFQMPDLYG RPEFDVRQTL
ARLDLSIDNV QISTVTTPEE DGRVISQSIP AQTMVKSGAS VSIIVGKLEI EAEGLRKIAV
PDVLGMSLSE AQETMSGNGL STGRITYEYS AILVPNTVIS QKPGANAFVS PGMPVDFTVV
TAAE