Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1096 |
Symbol | |
ID | 6355738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1198898 |
End bp | 1200079 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642668713 |
Product | hypothetical protein |
Protein accession | YP_001943144 |
Protein GI | 189346615 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000465883 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACCA TCCATCTCAA ACCAAAAGAA CAACGGCGAC TGCTTAAAGG ACACCTGTGG GTGTTCAGCA ATGAACTGCA GACCGTTCCC GGCGATATTG CCGCAGGCGA AACCGTCCGT CTCGTCACCC ATGACGACCG GCTTATCGGC ACCGGATTCT ATAATCCGCA CTCGCTCATA TCTTTCCGCC TCCTTTCCCG CAGCGGAGAA ATTCCTGACA AAGAGTTTTT CAAAAAGAAA ATAGCCGAAG CACTCGCACT TCGCGAAAAA ATCTACAGGT TGGACGACAC CAATGCATGG CGTCTTGTGC ATGGCGAATC GGACGGCCTG CCTGGACTCG TTATCGACCG CTTCAACCGG GCGATTGTTC TGCAGGCTTT TTCAGCGGGA ATGGACCGGC ATCTTCCTCT TGTCTGTGAC GTCATCGAAG AATTGCTGCA GCCTGAAGCG ATCATACTGC GTAACGAATC GGTACTGCGG GAACTTGAAG GACTCCCGCT CTACAAGGAA ATTATCAAGG GCGAACGGTC AGCGACCCTG CAGACCATTC ATGATGCAGG CATCAGCTAT GAAGTGGATC TTTACGAAGG GCAAAAAACC GGATTTTTTC TCGATCAGCG TGAAAATCGC AAAATCATCA GATCTTTTTC AGAAGGAGCC GATGTCCTGG ATGTATTTAC AAACGATGGC GGATTTGCTC TCAATGCGTT GCGCGGAGGA GCCCGTTCGG CCATTATGGT AGATATTTCA GAAGAGACCC TGAAACGGGC CGAAAAAAAT GCCGTATTGA ACGGATTTGA AAACTTCAGC CTTGTTGCCT CGGATGCGTT TGATATGCTG GGTAAAATGG TGGAGGCAAA AGAGCTTTTC GATGTAGTGG TACTCGATCC GCCAAGCTTC ACCAAAAGCC GAAAAAACCT GCCGACGGCA CTTAAGGCCT ATAAAAGACT CAACAAGCTC GGGCTGCAGC TGATTAAACC CGGCGGCTTC CTTGCCACAG CCTCATGCTC GCACCATGTA AACGAAGAGG ATTTTCTTGC TGCTATTCAT CAGGCCGCGC TTGCCGCCGG AAAACAGCTG CGGATGATCT ATAAAAACGC CCAGCCACCC GATCATCCGG TACTGCTCTC TATGCCTGAA ACCGGCTATC TGAAATTTGC CTGTTTCTAT GTGACCGGCT GA
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Protein sequence | MQTIHLKPKE QRRLLKGHLW VFSNELQTVP GDIAAGETVR LVTHDDRLIG TGFYNPHSLI SFRLLSRSGE IPDKEFFKKK IAEALALREK IYRLDDTNAW RLVHGESDGL PGLVIDRFNR AIVLQAFSAG MDRHLPLVCD VIEELLQPEA IILRNESVLR ELEGLPLYKE IIKGERSATL QTIHDAGISY EVDLYEGQKT GFFLDQRENR KIIRSFSEGA DVLDVFTNDG GFALNALRGG ARSAIMVDIS EETLKRAEKN AVLNGFENFS LVASDAFDML GKMVEAKELF DVVVLDPPSF TKSRKNLPTA LKAYKRLNKL GLQLIKPGGF LATASCSHHV NEEDFLAAIH QAALAAGKQL RMIYKNAQPP DHPVLLSMPE TGYLKFACFY VTG
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