Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1079 |
Symbol | cobT |
ID | 6355721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1182900 |
End bp | 1183970 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668696 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001943127 |
Protein GI | 189346598 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGC TTGAGCAGTT TGCATGCCTG CTGGACGGGA TCAGGCCGGT TGACCGGTCG CTGGTGCCGG TAATTCAGGC CCATCTTGAC GATCTTACCA AACCGCAGGG CAGCCTTGGC CGTCTTGAGG AGATTGCCAT GAGCTATGCC CTTGCGACCG GTTCTCCGGT TCCTGTGCTC GATAAAAAGA AAATATGCTG CTTTGCCGCC GATCATGGCG TGGCTGCCGA AGGAGTATCG GCTTTTCCGG CGGAAGTCAC CCCGCAGATG GTGTATAACA TGGTGCAGGG GGGAGCTGCC ATCAATGTGC TTTCAAAACA TGCCGGAGCC GATCTCGATG TTGTGGATGT CGGGGTCAAT CATGATTTTC CCGATATGCC GGGACTTATC CGGAAAAAGG TGGGGTATGG CAGTTCCAAT ATTTCCAGCG GTCCGGCAAT GAGCGAAACG GAAACGCTTC AGGCTGTCCT GTGCGGAGCC GAGCTTGCCG TTGATGCGCA TAAATCAGGA TACCATCTGC TTGGAACCGG TGAAATGGGC ATTGCCAATA CGACTCCGGC AACGGCACTC TTTTCCGTAT TGCTCGGCGT TTCTCCCGAA ACCATTACCG GAAAGGGTAC CGGGATTGAC GATAGTAGAC TGGAACACAA AAAAAAGATC GTCAGGAAAG CAATCGAGGT CAATGCATCG CGATGCTCTA CGCCGTTCGG GACGCTTGCC GCACTCGGAG GATATGAAAT TGCAGCTATC TCGGGTTTTG TGCTTGGAGC CGCCTCATGC AGGCTTCCGG TTGTTGTCGA TGGATTTATC TCCTCATCGG GTGCGGTTGC CGCCATGAAG ATCTGCCCTT CGGTGATCGA TTATATTTTT TTCAGCCACC TCTCGAATGA ACAGGGGCAT AGAGCCGTTA TGCAGCAGCT TGGCGCTCGG CCGATCCTTG ATCTCGATCT CCGTCTGGGT GAAGGAACCG GAGCGGCCCT TGCCATGCAG GTAATTGCAG GTGCCGTGAA ACTGTATAAT GAAATGGCGA CATTCAGTTC GGCAAGGATA AGCGAAAAAG AGACAGTCTA A
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Protein sequence | MTLLEQFACL LDGIRPVDRS LVPVIQAHLD DLTKPQGSLG RLEEIAMSYA LATGSPVPVL DKKKICCFAA DHGVAAEGVS AFPAEVTPQM VYNMVQGGAA INVLSKHAGA DLDVVDVGVN HDFPDMPGLI RKKVGYGSSN ISSGPAMSET ETLQAVLCGA ELAVDAHKSG YHLLGTGEMG IANTTPATAL FSVLLGVSPE TITGKGTGID DSRLEHKKKI VRKAIEVNAS RCSTPFGTLA ALGGYEIAAI SGFVLGAASC RLPVVVDGFI SSSGAVAAMK ICPSVIDYIF FSHLSNEQGH RAVMQQLGAR PILDLDLRLG EGTGAALAMQ VIAGAVKLYN EMATFSSARI SEKETV
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