Gene Clim_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1060 
Symbol 
ID6353762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1162820 
End bp1163584 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID642668677 
Productcobalt transport protein CbiM 
Protein accessionYP_001943108 
Protein GI189346579 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.127032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TCCTGCGGCC TTTCACGCTC TTGTCGCGTT CCATTTTTCT GGCTCTTTTC 
GTCCTTTTTC TCTGGAGTCC TGATGCCCAT GCCATGCATA TCATGGAAGG GTTTCTTCCT
CCCTCCTGGA GCCTTTTCTG GTGGGTGCTG ACCCTGCCGT TTCTTGTGGT GGGATTCCGC
TCGCTCCGGA AAATCGTCGA TGCCAATCCC CGGATGAAGC TGCTGCTCGC CATGGCGGGG
GCTTTCGCGT TCGTACTCTC ATCCCTGAAG ATTCCCTCGG TAACCGGAAG CTGTTCCCAC
CCGACCGGTG TGGGGCTGGG CGCGGTATTG TTCGGGCCTT CGGTCATGAG CGTACTCGGC
GTTATCGTGC TGCTCTTCCA GGCATTGCTG CTGGCGCATG GAGGTCTTAC TACGCTCGGG
GCCAATGCCT TTTCCATGGC TATAGCCGGC CCCTTTGTCT CTTACGGGAT TTACCGGCTC
ATGGTAATGT CGAAGGCGCC GGAATGGCTT GCGGTATTTC TTGCCGCGGC TATCGGGGAT
CTGATGACCT ATGTGGTCAC CTCGCTGCAG CTCGCCCTTG CCTTTCCCTC CGTTACCGGC
GGCATCGCGG CATCGCTGGG AAAGTTCATG ACCATTTTCG CACTGACTCA GGTGCCGCTG
GCCATCAGCG AGGGAATCCT GACGGTCATG GTGTTCAGCG CGATCAGGGA GTACGCCTCG
GAGCTGTTTC CGGCTTCGGG AACGCTTGCA AAGGAGGGTG TGTGA
 
Protein sequence
MKTILRPFTL LSRSIFLALF VLFLWSPDAH AMHIMEGFLP PSWSLFWWVL TLPFLVVGFR 
SLRKIVDANP RMKLLLAMAG AFAFVLSSLK IPSVTGSCSH PTGVGLGAVL FGPSVMSVLG
VIVLLFQALL LAHGGLTTLG ANAFSMAIAG PFVSYGIYRL MVMSKAPEWL AVFLAAAIGD
LMTYVVTSLQ LALAFPSVTG GIAASLGKFM TIFALTQVPL AISEGILTVM VFSAIREYAS
ELFPASGTLA KEGV