| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1023 |
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| Symbol | |
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| ID | 6353725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1125498 |
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| End bp | 1127807 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642668646 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001943077 |
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| Protein GI | 189346548 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.302797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCT ACTCAGTTAA GAAAGTTTTT CGTACGGCGG GACTGCTTGC CGTACTTGTG
TCGGTATGGC TGCCGGAAGC CTCGGCCGAA AGCCGGGTCA TAACCGGGGT CGTCACCAGC
CGCGATGACG GCTCTCCTCT GCCCGGAGCA ACGATTCGGA TCGAGGGAAG CGGCGCAGGG
ACGGTTACCG ATTCGCGCGG CGAATACACG CTGACCCTTC CTGATAATGC GGGCCGGGTG
ACGGTGAGCT CTATCGGTTA CGCAACGCGG TATCTCAAAC CCGGTCAGGG GAAGCTGCTC
AATGTCGCTC TTGCCGAAAG CGCGCAGTCG GCAGGCGAGA TCGTAGTTTC GTCGACACGT
TCCCAGGAAC AGCTGAAGAA CATACCGCGC AAGATCGAGG TGATCACCAG CAAGGATATC
GAGGCACTCG ATCCGGCAAG CGCTTCGGAA CTGCTCAAGA AGACTGCCGG CGTTGACGTC
ATCGAGTATC CCGGCATGCT TTCGGGGGTC TCGATCAGGG GATTCGTTCC GAATGCCGGC
TCGTATTACA ATGCCGAGTA TGTCTCGTAT CTGCTTGATG GCAGGCCGCT TGGCACGAGA
AACCTCGCGG CGGTCGATAT GAACATGGTC GAGCGGGTCG AGGTGATCAA AGGGCCTTCA
TCGGCACTGT ACGGATCGCA GGGCATGGGA GGCACCATCA ACTTCATTTC GAAAAAGTCC
CAGGGACCCA TCAAAGGCAA GGTATCGCTC GGCTACGGCA GCTTCGAAAC CTTCGACGGC
AGCGGCGCGA TCGGCGGTTC GATCAGCGAC CGTTTCGATT TCGATCTCGG TTTCCGCTAT
TTCAGCCAGA ACGAGGATTA CAAGATCGGC AATAACTCGC TCATCTCGGA TCCCTCCCCG
GAGATGGTCG AGGACGGGAT CGGCACCATG CGGAATTCGA CCTATTCCAG CAATTCCGGT
TCGCTCCGCA TCGGCTACCG TCTCAGCGAC AGTTTCAGGC TCGACCTGCG TGGCGCGTTT
TTCAACGCTC CCTCGGTTCA TACGCCCGGT TCCATCTGGG GTTATTATGA AGACGGATTG
AAGGATGTCT TCCGCAAAAC CGCGGATATT TCCCTTACCG GTACGGCGGG ACGACACCAT
GTCAAATTCA TGCCCTACTG GTCTGAAGAC GAGAGCCGAA ACCTGAAGAG CGCCTCGGGC
AAGACGTTCG CCTATTTCGA AGGTCAAAAC GAGGAGTACG GTTTTCAGCT GCAGGATGCC
GTAACCATCG GCAGGCATCG CGTGACGGCC GGCGTCGATT ACAATACATC GACCTACAAA
ACCCAAAGGC ACAGCGCTCC AGGGGTTTCC ATCGCTCCCT ACAGTCCGGA CGGCAGGACC
AGCAGCCTCG GCCTCTTTGC CGAAGCCGGG CTCTCGTTCT TCGACGGGCG GCTTGTCGTC
ACTCCGGGAA TGCGTTACGA CATGAGCACC TTTGCCATGC TTGATACGCC GCTGATCGCG
GACGTGGATA CGGAAGAGAC GCATGACGGG TTTTTCAGCC CATCGCTGGC TTTCCAGTAC
TCATTCCTGC CTGCACTGAA GACCCATGCG AGCATCGGTC GGGCGTTTGT GTCGCCCTCC
GCGTTGCAGA AGGCCGGCGA GTATATCGAT ACCTATGGCT GGACGGTGCG GGGCAACCCG
GATCTGGAGC CGGAAACGAG CGTGACCTGG GATGCCGGTC TGACCTGGAG CGACGAGAAA
CGGGGATTGC GGGCCGATGT CACCTACTAC GATACCGAGT GGGAGGATTT TATCACAACG
GAAAGCACCA GCGACGGCAG CAAGATCAAA ACCTATGTCA ATGCGGCAAG CGCCAGGCTG
AGGGGCATGG AGTTCGAACT CTCCTACGAT TTCGGAGCGA TGGCCGATTA CCGTTATTCC
TTGCGCTGCT ATGCCAGTTA CACCCGTCAA ATCGAAGCCG AGGTGACAAA GAACGGCGTC
GGGAGCCCGA TGAAATACGT TCGCGCCGGG CTCGGCTCGT TCGGTATCGA GTACAACGAC
TTCCATCTTC TCAATGCCCG TCTCAGCGCC CGTTACCTGG GTTCCCGTTA CGAGGATAAC
TATTTTACGT CGATACGTCC GACGCTGAAG AATTCCGTTC TTGAGCATGA ACCGGCTCTC
GTGTTCGATG CGACGGTCGG CGTTTCCATC GACGGGAAGA ACAGCGTCGC CCTGACGGTG
AAGAACCTTC TGGATGAAAA CTACACCGAA AAGGATGGTT ACAACATGCC GGGCAGGTCG
TTCGGCGTGA AATATACGGT AACGTTCTGA
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| Protein sequence | MKSYSVKKVF RTAGLLAVLV SVWLPEASAE SRVITGVVTS RDDGSPLPGA TIRIEGSGAG
TVTDSRGEYT LTLPDNAGRV TVSSIGYATR YLKPGQGKLL NVALAESAQS AGEIVVSSTR
SQEQLKNIPR KIEVITSKDI EALDPASASE LLKKTAGVDV IEYPGMLSGV SIRGFVPNAG
SYYNAEYVSY LLDGRPLGTR NLAAVDMNMV ERVEVIKGPS SALYGSQGMG GTINFISKKS
QGPIKGKVSL GYGSFETFDG SGAIGGSISD RFDFDLGFRY FSQNEDYKIG NNSLISDPSP
EMVEDGIGTM RNSTYSSNSG SLRIGYRLSD SFRLDLRGAF FNAPSVHTPG SIWGYYEDGL
KDVFRKTADI SLTGTAGRHH VKFMPYWSED ESRNLKSASG KTFAYFEGQN EEYGFQLQDA
VTIGRHRVTA GVDYNTSTYK TQRHSAPGVS IAPYSPDGRT SSLGLFAEAG LSFFDGRLVV
TPGMRYDMST FAMLDTPLIA DVDTEETHDG FFSPSLAFQY SFLPALKTHA SIGRAFVSPS
ALQKAGEYID TYGWTVRGNP DLEPETSVTW DAGLTWSDEK RGLRADVTYY DTEWEDFITT
ESTSDGSKIK TYVNAASARL RGMEFELSYD FGAMADYRYS LRCYASYTRQ IEAEVTKNGV
GSPMKYVRAG LGSFGIEYND FHLLNARLSA RYLGSRYEDN YFTSIRPTLK NSVLEHEPAL
VFDATVGVSI DGKNSVALTV KNLLDENYTE KDGYNMPGRS FGVKYTVTF
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