Gene Clim_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1006 
Symbol 
ID6355455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1097829 
End bp1099019 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content60% 
IMG OID642668630 
Productputative iron complex transport system substrate-binding protein 
Protein accessionYP_001943061 
Protein GI189346532 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.568283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACGT TCGGGTTTCG TTATCCGGGC AGGAGTGGAA GCATCCTGCT CCTGTTTCTG 
CTTCTGCTTG CCGCCTGTAC ACCTGCAGGC CGGCAGACCG GCAGCAGGCA GCAGGCTGAT
CGGGAGGCGG GCGAGGTGCG CTATGCAAGG CTGTTCACCA TCGCCAGGGA GAACGGCTGT
ACCCGGATCA CGGTTGCCGC CGCGGATTCC GCCAGCCGGC AGGATCCCTT CACCTATCTG
CTCGTGCCGG AAGAAAAGCC TGTTCCCGAA GACGCGGGCG AAGCGATGGT GGTCAGAATC
CCGCTGAAAA AGGTTACCTG TGAAAACGGC TTTCAGGTGT CGCTGCTCCA GATGCTCGGT
CGATCCGCCG CTCTTGCCGG CGTGTCGGGA AAGCAGCGGG TCGGTCAGGA CGACGTGCAT
CGAAAGATCG ACAGCGGGGA GCTTGCCGTG ACCGGATTCA TGAGGGGAAT GAACATGGAG
CGCCTGCTGA AGACCGCACC CGACATGGTG TTTGTCAACA CGACCGGAGT CGCCTCGGAC
GTGCCCGGAA AACTGCGCTC CTGCGGATTG ACGCCCGGCA TGTTTTCGGC CTCTCTCGAA
GAGCATCCGC TCGGAGCGTT CGAGTGGATC CGGTTCATGG GAGCGTTTTT CGACCGGGAC
AGCCTTGCCG ATGCGCTTTT CAGGGAACGG GAGCGAGCCT ATCTGGACGT GCAGGCCAGG
GCGGCGGCCG TGAAGCGCCG TCCTTCGCTC ATTGCCGGAT ACAGCAGAAA GGGAGCATGG
TCGACCATGG GCTCTTCGCG ATGGTTTGCG ACCATGCTTG ACCATGCAGG AGCGGACTAC
CTCTTCAAAG GCAAGCCATT CGAGCGGGGC CATCTCATCG GTCAGGAAGC AGGGCTCAGC
GCAGGCATGT CGGCCGATTT CTGGGTGAAT ACGCATTTCA GGGCCCTCTC CATCGACGAT
CTGACAGGCG AAGACTCCCG ATACGGGCTG TTCCGGAGCG TCCGCGAACG CAGGGTGTAC
AACAACAACG GCAGTTGCTT CGCAAACGGC AGAAGCCGGT TCTGGGATAC GGGTATGACC
GAACCCCATC TCATTCTGGC CGATCTTGTC AGCATTTTTC ACCCGGAACT GATGCCGGGT
CACAAACTGA AGTATTACAG GCGGCTCGAT CGGAAGCCGT TGAATCAATG A
 
Protein sequence
MKTFGFRYPG RSGSILLLFL LLLAACTPAG RQTGSRQQAD REAGEVRYAR LFTIARENGC 
TRITVAAADS ASRQDPFTYL LVPEEKPVPE DAGEAMVVRI PLKKVTCENG FQVSLLQMLG
RSAALAGVSG KQRVGQDDVH RKIDSGELAV TGFMRGMNME RLLKTAPDMV FVNTTGVASD
VPGKLRSCGL TPGMFSASLE EHPLGAFEWI RFMGAFFDRD SLADALFRER ERAYLDVQAR
AAAVKRRPSL IAGYSRKGAW STMGSSRWFA TMLDHAGADY LFKGKPFERG HLIGQEAGLS
AGMSADFWVN THFRALSIDD LTGEDSRYGL FRSVRERRVY NNNGSCFANG RSRFWDTGMT
EPHLILADLV SIFHPELMPG HKLKYYRRLD RKPLNQ