Gene Clim_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0989 
Symbol 
ID6355438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1079713 
End bp1080552 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content56% 
IMG OID642668613 
Productferredoxin 
Protein accessionYP_001943044 
Protein GI189346515 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAGTG AATCTTTTAT TCCTGCTGTA GCAAGTCTCG GCTCTCTGGC TTTCGTGCTC 
GGCATCATCA TCCTCTTCGT TTCGAAGAAA TTCTTTGTAG CCGAAGATCC GACCGTCAGT
ATGATCAACG CGCTCCTGCC GGGCGTGAAC TGCGGCGCCT GCGGATATCC CAGCTGCAGC
CAGTTTGCCG AAGAGCTTGT CAGAACAAGA AATCCGTCAA TGACCTGTCC GGTCGGCGGA
GGAGAACTTG CCGAAAAACT CGGCACCGCC CTCGGCATAA CCATGGCTGA ACCGAAACCC
GTAACCTGCG TTGTGCTCTG TCAGGGCCAT AACGGCAACG CCCGTGAAAG TGCGGAATAT
GTCGGCATTC GCGACTGCTG GGCTGCAGCC CAGGCCTTTG CGGGAACCAA ACAGTGCCGG
TTTGCCTGTA CAGGCCTCGG CTCATGCATC GCATTCTGCG ATTTCAACGC CATGCGCATC
GAGAACGGCC TGGTGGTTAT CGACAATGAG CTCTGCACCG GATGCGGAGC CTGTGTTCCG
GCCTGCCCCT ACGGCGTGCT GACCATGCAG GAGAAAAAAA CCGAACGGTA TTTCATTGCC
TGCAGCTCGC ACGACCGGGG CGCCGAGACC CGTAAAGCCT GCGACGCGGG TTGTACGGCC
TGTCAGAAAT GCGTCAGGGA GTGTCCGGAA CAGGCAATCG TCATCGATAA TTTCCTCGCC
TCCATCATCC AGGAAAAATG CACCTCATGC GGCAAATGCA TAGAGGTGTG CCCTACAAAG
GTGAACTGCA TCCTCCTGGA GCGCGACATG GAAACCGTGA AATCAAAAAA AGTCCCGTAA
 
Protein sequence
MYSESFIPAV ASLGSLAFVL GIIILFVSKK FFVAEDPTVS MINALLPGVN CGACGYPSCS 
QFAEELVRTR NPSMTCPVGG GELAEKLGTA LGITMAEPKP VTCVVLCQGH NGNARESAEY
VGIRDCWAAA QAFAGTKQCR FACTGLGSCI AFCDFNAMRI ENGLVVIDNE LCTGCGACVP
ACPYGVLTMQ EKKTERYFIA CSSHDRGAET RKACDAGCTA CQKCVRECPE QAIVIDNFLA
SIIQEKCTSC GKCIEVCPTK VNCILLERDM ETVKSKKVP