Gene Clim_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0987 
Symbol 
ID6355436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1077392 
End bp1078366 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content54% 
IMG OID642668611 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_001943042 
Protein GI189346513 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.379961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAC TCAAGCTTAA AGTTTCCTAC GCGCCGTTTG TCCGCTCAAA AGACTCCATC 
GAGTCGGTTA TGTACAACGT TGCCGTTGCG CTGCTTCCGG CGACGCTCGT CTCGATCTGT 
TTTTTCGGAT GGCGGGCGCT GCTGGTCACC GGGGTATCGA TCGTCAGTTC GATCTGTTTT 
GAATGGGCTA TCGATAAAAT AAGGAAAAAA CCGACCGCAT GTCTTGACGG CAGCGCTCTG 
GTGACCGGTC AACTCCTCGC CCTGAATCTC CCCTCGGGGC TCCCGCTCTG GATGGTCATC 
ATGGGCGCAT TCGTAGCCAT CGTTATAGCG AAACACCTTT TCGGCGGCCT GGGTTTCAAT 
ATTTTCAACC CGGCTCTCGT TGCCCGCGTC TTTCTGCTCA TCTCTTTCCC TGCCGCCATG 
ACCGAATGGT ACGCTCCATT TTCGGTTGAC ATGCAGACCG CAGCATCGCC TCTCGGCATA 
CTGAAAACCG ACGGACTGCA GGCCCTTGCA GGCTTCAATA CGCTCGACGC CTTTTACGGC 
ATAAGACCCG GAAGTCTTGG AGAAACATCG ATACTGGCGC TGCTTCCCGG TGCCGCCTGG 
CTGCTTTATA AAAAGTATAT CACCTGGCAC ATTCCTTTCG TTTTTATCGG CACGACCATG 
CTTTTTACCG GTATTTTTTA TCTCATCGAT CCGCTCGGTT ACGCCTCCCC TCTCTTTCAC 
CTGCTTACCG GTGGGCTGGT GCTCGGAGCC TTCTTCATGG CAACCGATAT GGTAACGAGC 
CCCCTTTCGC TCCGAGGCCA GATCATTTTC GGAATCGGAT GCGGAGTTCT GACCGCCATC 
ATACGGCTAT GGGGCGGCTA TCCCGAGGGG GTATCCTTCG CGATCCTTAT CATGAACGCC 
CTTGTTCCCC TCCTCGACAG GTGGGATGTA AGTGAAATCA AGGCTAAAAA ACAACCGTCG 
ATCAAAGCAG CATGA
 
Protein sequence
MEPLKLKVSY APFVRSKDSI ESVMYNVAVA LLPATLVSIC FFGWRALLVT GVSIVSSICF 
EWAIDKIRKK PTACLDGSAL VTGQLLALNL PSGLPLWMVI MGAFVAIVIA KHLFGGLGFN 
IFNPALVARV FLLISFPAAM TEWYAPFSVD MQTAASPLGI LKTDGLQALA GFNTLDAFYG 
IRPGSLGETS ILALLPGAAW LLYKKYITWH IPFVFIGTTM LFTGIFYLID PLGYASPLFH 
LLTGGLVLGA FFMATDMVTS PLSLRGQIIF GIGCGVLTAI IRLWGGYPEG VSFAILIMNA 
LVPLLDRWDV SEIKAKKQPS IKAA