Gene Clim_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0968 
Symbol 
ID6355417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1061134 
End bp1062195 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content51% 
IMG OID642668592 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001943023 
Protein GI189346494 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.110398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGT TACATGATTT GAGAGTTTCA CGCATCAAGC GCCTGTCATC TCCAGGGGCG 
CTCAAGGATA AATTGCCGGT TAATGATCGT ATTGCATCAA CCGTCAGCTC GGGTCGTCGT 
GAAGTAGAGA ATATATTGAA CGGTACGGAC AATCGCCTGC TTGTAATCGT CGGCCCCTGC 
TCGATCCATA ATGTGGATGC CGCCCTCGTT TATGCAGAAA AGCTTTCCGG AATGAGAAGC 
GAGCTCAGGA GTGAGCTTTG CATCCTGATG CGGGTCTATT TTGAAAAGCC GAGGACAACG 
GTGGGGTGGA AAGGATTTAT CAACGATCCT CATCTCGACG ATTCATACGA TATAGAACAT 
GGCCTCTATT ATGCCCGCAA GCTGCTGATC GATATCAATG CGCTTGGCCT TCCGGCGGCG 
ACGGAGTTTC TCGATCCCAT TACTCCTCAG TATGTTGCCG ATGTGGTGAG CTGGGCGGCT 
ATAGGCGCCA GAACCATAGA ATCACAGACG CACCGGCAGA TGGCCAGCGG TCTCTCAATG 
CCTGTCGGGT TTAAAAATTC GACCGACGGA CGCATCAATG TCGCCGTCGA TGCGATTCGC 
TCGGCAATGC ATCCGCACAG TTTCCTGGGA ATCGATCGTG AGGGTCACAG CAGTGTCATC 
ACTACGAAAG GAAATCCTTA TGGTCATCTC GTGCTCAGAG GCGGCATGAC GCCGAATTAC 
GACGCGCAAA GTATTGCTGC TGCGGAACAA CTGCTTGAGA AAGCCGGACT TTCCCAGACC 
CTTCTGGTGG ATTGCAGTCA TGCCAATTCC GGCAAGAAAC ACGCCCAGCA GCTTAAAGTC 
TGGGAAAATA TTCTTGAACA GAAAGCCCGC GGCAACAGAA GTATCGCCGG GGTCATGATC 
GAAAGCAATC TCTGTTCAGG AAACCAGCCC TTTCCCGAAG ACCCGGAAAA ACTCAGATAT 
GGCGTTTCAA TAACCGACGA ATGTATCTCT TGGGAGGAGA CCGAACGGAT GCTCCGTCAG 
GGCGCTGACG TTATCGCAAA ACTGATGTCA AAAGAAGCAT AA
 
Protein sequence
MEQLHDLRVS RIKRLSSPGA LKDKLPVNDR IASTVSSGRR EVENILNGTD NRLLVIVGPC 
SIHNVDAALV YAEKLSGMRS ELRSELCILM RVYFEKPRTT VGWKGFINDP HLDDSYDIEH 
GLYYARKLLI DINALGLPAA TEFLDPITPQ YVADVVSWAA IGARTIESQT HRQMASGLSM 
PVGFKNSTDG RINVAVDAIR SAMHPHSFLG IDREGHSSVI TTKGNPYGHL VLRGGMTPNY 
DAQSIAAAEQ LLEKAGLSQT LLVDCSHANS GKKHAQQLKV WENILEQKAR GNRSIAGVMI 
ESNLCSGNQP FPEDPEKLRY GVSITDECIS WEETERMLRQ GADVIAKLMS KEA