| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0920 |
|---|
| Symbol | |
|---|
| ID | 6354157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1004135 |
|---|
| End bp | 1004554 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642668547 |
|---|
| Product | protein of unknown function UPF0047 |
|---|
| Protein accession | YP_001942978 |
|---|
| Protein GI | 189346449 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT ACCACAAGGA ACTCTGGATG CAGGTGCCTG CCAGAATGGA CTTCGTCAAC
ATTACCGGCG ATGTGGAAAA GGCGCTTCTG GAGAGCGGCA TCCAGGAAGG GTTATGCCTG
GTCAACGCCA TGCATATTAC CGCTTCGGTG TTCATCAACG ACAATGAACC GGGTCTGCAC
CAGGATTACA AACGGTGGCT TGAAGAGCTG GCGCCTCACG AGCCGATAAG CCGGTACCGC
CACAACATGA CCGGCGAGGA TAACGGCGAT GCGCATCACA AGCGGCAGAT CATGGGGCGC
GAGGTGGTTG TTGCCGTTAC GAAGGGCAAG CTGCATTTCG GGGCATGGGA GCAGATATTC
TACGGCGAGT TCGACGGCAT GCGCAAGAAG CGGGTGCTGG TGAAGATTAT CGGCGAATAG
|
|---|
| Protein sequence | MKSYHKELWM QVPARMDFVN ITGDVEKALL ESGIQEGLCL VNAMHITASV FINDNEPGLH
QDYKRWLEEL APHEPISRYR HNMTGEDNGD AHHKRQIMGR EVVVAVTKGK LHFGAWEQIF
YGEFDGMRKK RVLVKIIGE
|
|---|
| |