Gene Clim_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0902 
Symbol 
ID6354139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp988753 
End bp989490 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID642668529 
ProductLmbE family protein 
Protein accessionYP_001942960 
Protein GI189346431 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACAAT CATCTGAAAA AGTCTACGCC CTGGCGTTCG GCGCCCATCC CGACGACGTT 
GAACTTGCCT GCGGGGCAAC ACTGCTGAAA ATCATGAAAG AGGGGCGTCG CGTAGCGGTC
TGTGACCTTA CCCGAGGTGA ACTCGGAACG CTGGGCAGTA TCGAAATCAG AAAAGCCGAA
GCGGAAAAAG CCCGACAAAT CATGGGTTAT GCAGCACGGG TAACGCTGGA TCTTGGAGAC
GGAAAACTCT TTTATAATGA GGAAAATCTG GCTTCGATAA TCAGGGTGAT CCGTCGGTTC
AGACCAGAGG TGGTTTTTGC CAATCCTCCG GACGAGCGAC ACCCTGATCA TATGAAAGCC
TCGAAGCTGG TTGCCGATGC GGTTTATTAT GCCGGACTCA AACAACTCGT CACAACTGAA
GATGACTGCA AACAGGATGC CTTCAGACCG GCTCATCTGC TCTATTATCT GCAGTTCAAA
CATCTCGATC CCGATATCAT CGTCGATGTC ACCGATACAT TTCACGCATC GAGAGCCGGT
ATTTCAGCTT TCGGTTCGCA GTTTTACCAT GAAGGTTCTT CGGAAGAACC GGCAACCCTG
ATCAACAGAA AGGAGTTTCT TACGGGTCTC GAAGCCCGGG CACGGTATTT CGGCGAACAG
ATCGGCTCTC TTTACGGAGA GGGGCTGCTG ACGACCAGAA CGCCGGGAGT CACAACCTTC
AGCACACTGT TTCCATAG
 
Protein sequence
MKQSSEKVYA LAFGAHPDDV ELACGATLLK IMKEGRRVAV CDLTRGELGT LGSIEIRKAE 
AEKARQIMGY AARVTLDLGD GKLFYNEENL ASIIRVIRRF RPEVVFANPP DERHPDHMKA
SKLVADAVYY AGLKQLVTTE DDCKQDAFRP AHLLYYLQFK HLDPDIIVDV TDTFHASRAG
ISAFGSQFYH EGSSEEPATL INRKEFLTGL EARARYFGEQ IGSLYGEGLL TTRTPGVTTF
STLFP