Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0898 |
Symbol | |
ID | 6354135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 984417 |
End bp | 985421 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642668525 |
Product | chlorophyll synthesis pathway, BchC |
Protein accession | YP_001942956 |
Protein GI | 189346427 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.714457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA AAGCCATTGT TTTCAGCGGA GTCCGACAGA TTTCTCTCTG CGAAGTCACC CTGAAACAGC TCTCATCAAC CGATGTGCTT GTTGAAACCT ACTGGTCGTC AATAAGCACC GGTACGGAAA AAATGGCCTA TAACGGCCTT ATCCCTTCTC CTCCGTTCAT CTTCCCGTTC ATTCCGGGCT ATGAAACCGT TGGCAGGATC ATCGAGGCGG GAGATCATGT CAACCAGAGT TTGATCGGAA AGTTTGCCTA TGTAGCCGGC TCGTTCGGGT ACATAGACGT CAACGCAGCA TTCGGAGGAG CTTCGCAGTA TATCGTATGT CCCGTTGACA GCATTACGCT GCTTGACTCC ATTGCGAATC CGCAATGTGG TATCGCACTG CCTCTGGGCG CAACTGCATT GCATATTATC GATCTTGCCG CAGTTGAGAA CAGAAAGGTG CTGATACTCG GTCAGGGCGC CGTCGGGATT CTGGCATCGG AACTGGCCCG TCACATGGGA GCCCGGCTGA TTGCCGTTAC GGAGCCCTAT CAGAACAGGC TCAGGTTTTC TTCTGCCGAT CTGAAAGTCA ACCCTGACAA CGAAGATGTT TCGGCAGCCC TTGCCGGCCA TGAGTTCGAT GTACTGATTG ACAGTACCGG TATCATGAGC GCAATCGATA CAGGACTCCG GTTTCTCAAA TTTCATGGCG TCGTGATCTT CGGCGGCTAC TACCAGCGTA TGAATATCGA TTATTCACAG GCGTTCCAGA AAGAGTTATC GTTCATTGCG GCAAAGCAGT GGGCGCACGG CGATCTTGAA AGGGTTCGCG ATCTCATCGC GGCCAAAAAA CTCAATGCCG AAAAAATTTT CACCCACCAG TGCCAGGTCG ATGATAACAT TACGTCGGTC TACATGCAGG CGTTCGGCGA TCCGGACTGC CTGAAAATGA TTCTGCACTG GAAAACCGAT GCTGAAGAAC AGGAACGGGC CTGCTATCTG ACCAGCGAAA CCTGA
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Protein sequence | MKSKAIVFSG VRQISLCEVT LKQLSSTDVL VETYWSSIST GTEKMAYNGL IPSPPFIFPF IPGYETVGRI IEAGDHVNQS LIGKFAYVAG SFGYIDVNAA FGGASQYIVC PVDSITLLDS IANPQCGIAL PLGATALHII DLAAVENRKV LILGQGAVGI LASELARHMG ARLIAVTEPY QNRLRFSSAD LKVNPDNEDV SAALAGHEFD VLIDSTGIMS AIDTGLRFLK FHGVVIFGGY YQRMNIDYSQ AFQKELSFIA AKQWAHGDLE RVRDLIAAKK LNAEKIFTHQ CQVDDNITSV YMQAFGDPDC LKMILHWKTD AEEQERACYL TSET
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