| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0879 |
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| Symbol | |
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| ID | 6354116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 961697 |
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| End bp | 963985 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642668506 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001942937 |
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| Protein GI | 189346408 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.573666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAA AAACCTATCA TGTCAAAGGC ATGCACTGCG CAAGCTGCGC AGCGATCATT
ACCAAAAAGC TTTCCCAGAC GCCAGGAATC GAGAAGGTCG AGGTCAACCT TGCCACCGAA
CAGGCAAAAG TGTCGTTCAG GGAACACGAT CTTTCCGACA GCGAGATCAA CGACATTGTC
GGTAAGTTCG GTTATAAGCT CACTTCGAAA GAGGATGGAG ATGCCGGTAC AGGCGGGATC
CCAGCCGAAA TAAAAGGGAG AGATCCCGAC ACAAAGGCGT TCAGCGAAAA ACAGGAACAG
GTGAAACAGC TGAAGCGTCT GGTCAGTTTC TCGCTCCCGG CAGCTATGGC GGTATTTTTT
TTCATGATGT GGGATATCGC TTCTACGGCA TTGCACAGCA TGCCGCACAT GCCTATCTCC
ATGGAGGTCT TCAACGGCCT TACCATGATT CTTGCCGCAA TTTTCATCGT CAGGATCGGC
AAACCCTTTC TTGACGGCAT TCTTCTCTTC ATACGCCACG GAGCGGCAAA CATGGATACG
CTGATCGGAA TCGGAACCCT CTCGGCCTTC ACATACAGTT CACTCATCAC AATTTTCCCT
TCTTTCAGAA ATATGCTTGG CCTTCCCTCC CATACCTATT TCGATGTATC GATTGTGGTT
ATCGGGTTCG TTCATCTCGG TAAATATCTG GAAGCCCGGT CGAGACTTAA AACTGGTGAA
GCAATAGGCA AGCTCGTCGG TCTGCAGGCA AAATCGGCAC TGCTCGTCCG CAAGGGAGAG
GAGATTGAAA TTCCTGTCGA AAAGGTTAAA AAAGGCAACC TGCTCCTGGT CAAACCGGGA
GCGGTCATTC CGGTTGACGG GATTATTGCG AATGGAAGTT CCTCGATCGA CGAATCGATG
GTAACGGGCG AGCCCCTGCC CGTCGACAGG AAAGAGGGGG ATCCGGTTAT TGGCGGCACC
ATAAACCGTC AGGGCTCGTT CACTTTTACC GCTTTGAAAG TCGGCAGCGA CACCCTGCTT
GCACGGATAA TTTCTATGGT GGAGGAAGCC CAGGGATCAA AAGCCCCTAT TCAGAACATC
GCCGACCGGA TCGCATCCAT ATTCGTGCCT GCAGTACTTG TTATAGCCTC ACTCACCCTG
ATTGCGTGGC TTACCATCGG GACAGCGTTC CTCGGGTTCC CGGCGGCGCT CTCCTACGGG
ATCATGGGCT TCACAGGCGT TCTGGTAATC GCCTGCCCCT GCGCACTCGG GCTTGCAACC
CCGACGGCAA TCATTGTCGG AATCGGAAAA GGGGCGGAAT ACGGGATGCT GATCCGCAAC
GCGGAAAGCC TTGAACGGCT CAGTTCGGTA GATACCGTCG TTTTCGATAA AACCGGTACC
ATAACCAGAG GTCTTCCGGA AGTCACCGAC ACAGGCTCTC TCGACGGCAA CTCGTCACCT
GACGAACTTC TGCTGCTTGC AGCAGCCGTG GAACGATATT CGGAACACCC ACTGGCCGGG
GCGATTGTCA AAGCGGCAAG AGCCAAAGGA GCTGCACTTC CCGAAATAAC GGCATTCGAA
GCCATGGAAG GTATCGGCGT CAGGGCGAAC ATCGGGGAAC TATCCGTAAC GGTCAGAAAA
CCCGGAGCAG AGGAAAACGG TCTGCCGGTC GTTCAAACAC TGCTGCATCA GGGAAAAACC
GTCATCGTCA TTGAAAAAGG AAACACGGCA TCAGGCTTTT TAGCTCTTTC CGACACCATC
AGAAATGGCG CAAAAGAGGC TGTCGCCGAA CTCCGCAGGA AAGGGATACG CATTATCATG
CTGACCGGTG ACAATCCTTC GTCTGCGGGT TATATCGCAG CACAGGCCGG CATCGATGAG
GTGATTGCCG GAGTGCTGCC GGATGAAAAA GCCGAGAAAA TAGCTGCGCT GCAGAAAGAA
GGCCGAACCG TAGCCATGGC AGGAGACGGT ATCAACGATG CGCCCGCCCT TGCCCGCGCC
GATGTTGGCA TCGCCATGGC CACAGGAACC GACATTGCCA TGGAATCGGC AGGTATAACG
CTGCTGAAGG GTGATATCAG AAAAATTTCT CAGGCAATTA CGCTCTCGAA ATCGACCATG
CGGGTTATCC GGCAGAACCT CTTCTGGGCG TTCATCTATA ATATTATCGG CATTCCCCTT
GCTGCCGGAG CTCTCTACCC TCTTTTCGGA ATTTTCCTCA ATCCTGTTTT CTCCGGCATT
GCCATGGCGG GCAGCAGCGT ATCGGTGGTC AGCAATTCAC TGCGCCTGAA AACGAAAAAA
CTTCATTGA
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| Protein sequence | MDEKTYHVKG MHCASCAAII TKKLSQTPGI EKVEVNLATE QAKVSFREHD LSDSEINDIV
GKFGYKLTSK EDGDAGTGGI PAEIKGRDPD TKAFSEKQEQ VKQLKRLVSF SLPAAMAVFF
FMMWDIASTA LHSMPHMPIS MEVFNGLTMI LAAIFIVRIG KPFLDGILLF IRHGAANMDT
LIGIGTLSAF TYSSLITIFP SFRNMLGLPS HTYFDVSIVV IGFVHLGKYL EARSRLKTGE
AIGKLVGLQA KSALLVRKGE EIEIPVEKVK KGNLLLVKPG AVIPVDGIIA NGSSSIDESM
VTGEPLPVDR KEGDPVIGGT INRQGSFTFT ALKVGSDTLL ARIISMVEEA QGSKAPIQNI
ADRIASIFVP AVLVIASLTL IAWLTIGTAF LGFPAALSYG IMGFTGVLVI ACPCALGLAT
PTAIIVGIGK GAEYGMLIRN AESLERLSSV DTVVFDKTGT ITRGLPEVTD TGSLDGNSSP
DELLLLAAAV ERYSEHPLAG AIVKAARAKG AALPEITAFE AMEGIGVRAN IGELSVTVRK
PGAEENGLPV VQTLLHQGKT VIVIEKGNTA SGFLALSDTI RNGAKEAVAE LRRKGIRIIM
LTGDNPSSAG YIAAQAGIDE VIAGVLPDEK AEKIAALQKE GRTVAMAGDG INDAPALARA
DVGIAMATGT DIAMESAGIT LLKGDIRKIS QAITLSKSTM RVIRQNLFWA FIYNIIGIPL
AAGALYPLFG IFLNPVFSGI AMAGSSVSVV SNSLRLKTKK LH
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