| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0855 |
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| Symbol | |
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| ID | 6353927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 937308 |
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| End bp | 938393 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642668480 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001942913 |
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| Protein GI | 189346384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACA ATCAGACCTT CGCCGAAATA TTCAGGGCCA GCGGCATAAG CCGACGGGAT
TTTTTGAAAT TCTGTTCACT GACCTCAGTC TATCTCGGTC TCTCACCTTC GATTGTACCA
CAGATCGTTC AGGCTATGGA AACAAAGCCG AGAACTCCGG TTATCTGGCT TCACGGTCTT
GAATGTACCT GTTGTTCGGA ATCATTCATC CGTTCTTCAC ATCCCACCAT CGAGGATATC
ATCTTCAACA TGATCTCTCT CGACTATGAT GATGTTCTCA GCGCTGCGGC CGGCCATCAG
CTTGAGGATG TGCGTAAAAA AATCATGCAG GAGTACAAGG GTAAATACAT TCTTGCCGTT
GAAGGCAACG CGTCAACGAA GGATGACGGG GTCTATTGCA TGGTGGGAGG CGATTCATTC
CTGAACACGC TGAAGGAGAC CGCGGCAGAT GCTGCGGCAA TCATCGCCTG GGGGGCTTGT
GCATCTTACG GATGTGTTCA GAACGCCGAT CCGAACCCTA CCGGTGCAGC GCCTGTTTCG
GAAATCATCA AGGATAAACC CATCGTCAAC GTTCCGGGGT GTCCACCTAT CTCCGAAGTG
ATGACCGGGG TTGTGGCACA TTTCCACACC TTCGGCACCC TGCCCGAGCT CGACCGCATG
GGCAGGCCGA AAGCCTTCTA CAACACCAGG ATTCACGACA AGTGTTATCG GCGCGCATTT
TACGATGCCG GCATGTTTGT CAGAAGCTTC GACGACGAGG CGACAAGAAA AGGGTGGTGT
CTCTACAAAA TGGGGTGCAA GGGCCCGACA ACCTATAATT CCTGTTCGAA AATTCAGTGG
AACGGCGGGG TCAGCTTTCC GATCGGGTCC GGCCATCCGT GCATCGGCTG TTCCGAACCG
AACTTCTGGG ACAAGGGGCC TTTCTATGAG CGTCTTGCCG ATGTTTCGTT CCTCGGTACG
GACAGCAATG CCGACAGGAT CGGCGTGATA GCCGTAGGAG CAGCTGCAGC CGGAGCTGCG
GCACATGCTG CCGTAACGGC AGTCAAAAAG GCCAAGGCAG GAAAGGATTC AGAGGATAAA
GCTTAA
|
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| Protein sequence | MHNNQTFAEI FRASGISRRD FLKFCSLTSV YLGLSPSIVP QIVQAMETKP RTPVIWLHGL
ECTCCSESFI RSSHPTIEDI IFNMISLDYD DVLSAAAGHQ LEDVRKKIMQ EYKGKYILAV
EGNASTKDDG VYCMVGGDSF LNTLKETAAD AAAIIAWGAC ASYGCVQNAD PNPTGAAPVS
EIIKDKPIVN VPGCPPISEV MTGVVAHFHT FGTLPELDRM GRPKAFYNTR IHDKCYRRAF
YDAGMFVRSF DDEATRKGWC LYKMGCKGPT TYNSCSKIQW NGGVSFPIGS GHPCIGCSEP
NFWDKGPFYE RLADVSFLGT DSNADRIGVI AVGAAAAGAA AHAAVTAVKK AKAGKDSEDK
A
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