Gene Clim_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0854 
Symbol 
ID6353926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp935558 
End bp937093 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content49% 
IMG OID642668479 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_001942912 
Protein GI189346383 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAGC TGCCATCAGG TGCTGAAATA CAGAGTATCA TCGCTACGTT GAAAACAGGC 
GTTGGTTTTT TCATACCTGA AATCTATCTC TCAGTGCTTT TCATGCTCCT GATCGTGATC
GATCTGGTGG TGAAAGGCAG GAAAAACAAT CTGCTGTCGG CAGTTACCGC TCTTGGTCTC
GCGGGCGCCT TCTATTTTAT CTATCAGCAG CATCTGCTTG AAGCGGGAGA GATTTTTTTC
GGGATGTACG TTCTCGATGA GTTTGCCCTC TTTTTCAAGT ACTTTTTTGT TCTGTCAGGC
ATCCTCGCTG TTCTGGTATC GGTTGCCGAT GATCAGCTTA ACCGGCAGGT CAGAAGCATC
GGCGAGTACT ATGCACTGAT TGTTGCCATG GTTATCGGTA TGATCATGAT GGCATCATCA
GCTGACCTTC TGATGATGTT CCTTTCGATG GAACTTGTCG GTCTTACCGC ATATGTGCTG
ACCGGATACC TGAAAAACGA TCCGCGATCT GCTGAAGGCG CACTGAAATA TCTTGTTTAC
GGTGCAGTCT CTTCAGGACT TATGGTCTAT GGTTTTTCAC TTATCTACGG TCTTACCGCA
GAGACGAATA TCATGAAGAT CAGTGCCGAG CTTGCACTTC ACGGTTACGA TCCACTTGTC
ATGATGCTTG CTTCACTGCT CATTCTTGCC GGTTTCGGAT ACAAGATCGG TGCCGTGCCG
TTTCATTTCT GGAGTCCGGA TGTCTATGAA GGTGCTCCGA CTCCGGTCAC TGCATACCTT
TCGGTAGGTT CCAAAGCAGC CGGTTTCGCA ATACTCATGC GATTTTTCTA TGTTGCCATT
CCGCATGGAG GCGAACCTTT TCAGGATATT GCAGGAATGG ACTGGCTCTC CCTGCTGATC
GTGATCTCCA TCGCATCCAT GATTTATGGT AATGTCGTCG CTCTCTGGCA GAAGAACGTG
AAGAGACTGC TTGCTTATTC CTCAATAGCT CATGCGGGTT ATGCGCTGCT TGGCATCATC
GCCATGGATG AGCTCGGTAC ACAGGCAACC CTGTTCTACC TGCTTGGATA TCTTCTCATG
AACATCGGGG CATTCTATGT CGTCATCCTG ATTTCAAACA GAACCGGCAG CGAGAACCTC
GAGGATTACC GCGGACTGGG CAGAAAGATG CCGCTTGCAG GTGCTGCACT GACCGTGTTT
CTTATCTCCC TTGTCGGTCT TCCTCCGACA ATCGGTTTTA TCGGCAAGCT TATGATATTT
TCGGCTCTGC TCGCCAAGGG ATCTGTTTTT ATCTGGCTTG CCCTGATCGG CGTAATGACC
AGCGTTATCT CTCTCTACTA CTATATGCTC ATTCCGCTGA ACATGTACCT CAGGGAGTCG
CAGCAGCCCG ATGAAGGTCA TGACGCAACG GGAGTGGTTC ACCAGATAGG TATTGCTGTG
CTGATGATTC TGACCATTTA TTTCGGTCTT TTCTTCAAGC CCTTGCTGGA TTTTGCAAAG
ATTTCCTCAT CGATGCTTGG CATGACTCTG TACTGA
 
Protein sequence
MFELPSGAEI QSIIATLKTG VGFFIPEIYL SVLFMLLIVI DLVVKGRKNN LLSAVTALGL 
AGAFYFIYQQ HLLEAGEIFF GMYVLDEFAL FFKYFFVLSG ILAVLVSVAD DQLNRQVRSI
GEYYALIVAM VIGMIMMASS ADLLMMFLSM ELVGLTAYVL TGYLKNDPRS AEGALKYLVY
GAVSSGLMVY GFSLIYGLTA ETNIMKISAE LALHGYDPLV MMLASLLILA GFGYKIGAVP
FHFWSPDVYE GAPTPVTAYL SVGSKAAGFA ILMRFFYVAI PHGGEPFQDI AGMDWLSLLI
VISIASMIYG NVVALWQKNV KRLLAYSSIA HAGYALLGII AMDELGTQAT LFYLLGYLLM
NIGAFYVVIL ISNRTGSENL EDYRGLGRKM PLAGAALTVF LISLVGLPPT IGFIGKLMIF
SALLAKGSVF IWLALIGVMT SVISLYYYML IPLNMYLRES QQPDEGHDAT GVVHQIGIAV
LMILTIYFGL FFKPLLDFAK ISSSMLGMTL Y