Gene Clim_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0846 
Symbol 
ID6353918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp927063 
End bp927590 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content52% 
IMG OID642668471 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_001942904 
Protein GI189346375 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA CAGAAGAAGG AAAGGGGTTG TCCCAGTCGT TACAGCAGAG CGCGGCTGCA 
TATGCGGTCA TACGGGAGCA GTTTGCCGAT GCGATTTCGG ATTTTGACGC CAATGAGACC 
ATGCCGTTTT TCGAAGTGAT CGAAACAGAA AAATGGCCTG ATATTGCGCT TTTCATGCGT 
GATCATCCGA AGTTGAAGTT CAACTATCTG GCATGCCTTT CCGGTGTCGA TTATCCGGCA 
GAAGAGAAGC TTGGCATAGT CTGCAATGTC GAGTCGCTTG GTGCTTTCGG TCACAGGATC 
GCAGTCAAGG TCAAGTGTTC CCGTGAGGGA GGTTCGATTC CTACAGCGGC ATATGTCTGG 
CATACGGCAA ACTGGCATGA ACGTGAGGCT TACGACATGT TCGGCATGCA GTTCGCCGGT 
CACCCCGATC CTCGCAGGAT TCTCTGCCCG GAAGACTGGG AAGGGTTTCC GCTTCGCAAG 
GATTACAAGG TGCAGGAGAG CTATCATGGG ATCAAGGTAC CGTATTAA
 
Protein sequence
MAETEEGKGL SQSLQQSAAA YAVIREQFAD AISDFDANET MPFFEVIETE KWPDIALFMR 
DHPKLKFNYL ACLSGVDYPA EEKLGIVCNV ESLGAFGHRI AVKVKCSREG GSIPTAAYVW 
HTANWHEREA YDMFGMQFAG HPDPRRILCP EDWEGFPLRK DYKVQESYHG IKVPY