| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0829 |
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| Symbol | |
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| ID | 6353899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 911149 |
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| End bp | 912267 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642668453 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001942888 |
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| Protein GI | 189346359 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.715412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGAAGG GGGGCAAGGT GCAGGATCAT ACCCATGAAC ACTATATGCA GCGTTGCCAT
GAGCTTGCCC TCATGGGGTC GGGAGCTGTC AGCCCCAATC CCATGGTCGG CTGTGTGATT
GTTTCCGGAG GACAGGTTAT CGGCGAAGGG TTCCATAGGC AGTACGGCGG CCCGCATGCC
GAAGTCAATG CCGTCGCTTC GGTAGCTGAT CGTGAGCGGC TTCGCAATGC AACGCTCTAC
GTCAATCTTG AACCCTGCTC CCATTTCGGA AAAACTCCGC CCTGCAGCGA TATGATCGTT
GAAATGGGCA TTCCCCGCGT GGTTATCGGT TGCCGGGACC CGCATCTGAA GGTTGCCGGC
AAAGGGATAG CCAAACTGCT TGCCGGCGGT GTGGAGGTGA TTGAAGGTGT GCTCGAAACC
GAATCGGAAC GTCTTAATGA GGCATTTATC ACCGTTCATC GGAAAGGCCG TCCCTTTGTC
GCCCTGAAAC TTGCGCAGTC ACTCGACGGG AAGATCGCTA CGGTATCGGG CGCTTCGAAA
TGGATAACCG GAGAGGAGGC AAGAACCGAA GTACACCGTC TCCGCTGTTC CTTCGATGCG
GTGCTTACCG GTGCCGCTAC CGTCATTGCC GACGATTCCC GGCTCACCGT AAGGCACTGT
GCCGGGCGTA ACCCGATTCG CGTCGTGCTC GACAGTCGGT TGAGCATTCC GATCGGAGCC
GGTATTTTCG ATACGGAGGC CGAGACGGTT GTTTTTACTG CGCTATCGAT GCAGGACTCG
CAAAAAGCCC GTCAACTCGC CAAAAAGGGA GTCGCGGTGT TCGGTGTAGC CGAACGGGAA
TGCGGTCTCG ACCTTGCAGC CGTGCTCGAG AGATTGCATG AGCGACGTAT ACTTTCCGTT
CTTGTAGAGG GGGGAGGCCG TCTGGGGTCA TCGTTCGTCA GAATGGAACT GTTCGACAAA
CTCTACATGT TCATTGCGCC CGTACTGTTT GGAGGTGACG GCCTGAGCGC ATTTGCTCCT
ATCGGGATAA CACTTCCCGA ACAGGCGATC AGGCTCGATT TCGAACCGCC CTCCCGATTC
GGCAGGGATC TACTTCTTAC GGCATATGTT TCAGGTTGA
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| Protein sequence | MLKGGKVQDH THEHYMQRCH ELALMGSGAV SPNPMVGCVI VSGGQVIGEG FHRQYGGPHA
EVNAVASVAD RERLRNATLY VNLEPCSHFG KTPPCSDMIV EMGIPRVVIG CRDPHLKVAG
KGIAKLLAGG VEVIEGVLET ESERLNEAFI TVHRKGRPFV ALKLAQSLDG KIATVSGASK
WITGEEARTE VHRLRCSFDA VLTGAATVIA DDSRLTVRHC AGRNPIRVVL DSRLSIPIGA
GIFDTEAETV VFTALSMQDS QKARQLAKKG VAVFGVAERE CGLDLAAVLE RLHERRILSV
LVEGGGRLGS SFVRMELFDK LYMFIAPVLF GGDGLSAFAP IGITLPEQAI RLDFEPPSRF
GRDLLLTAYV SG
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