Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0827 |
Symbol | |
ID | 6353897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 908806 |
End bp | 910446 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668451 |
Product | protein of unknown function DUF814 |
Protein accession | YP_001942886 |
Protein GI | 189346357 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGCA ATTACTTCAC GCTTTACCAT ACCGCCATGG AGCTGCATGA ACGGCTTGCC GGCGGGTTCG TATTCGAAAT CCATTCGCAG CAGAAAAACG AGCTGACACT GAGCTTCGTC ACGGCAGCCG GAGATCACCT GCAGGTGGTA ATGGTATCGC GCAAGCCTGA ACTCTGCCTT TTCACAAGAG AAGGCATGAA CCGACGGAAA CGGCAGAGCG CAAACCTGCT GCATACCATC TGCGAGCGGG AGGTCACCGG CGTTGCAATG TCACCGTACG ACAGGGAAAT TCTTGTCGGG CTCTCGGGAG GCGACACGCT TGTATTGCGC CTCTTCAGCG CCTCAGCCAA TGCATTCCTC GTCTCGGAAG GGATCATTAC CGATGCCTGT ACCTCCAGGA ACGACCTGAT CGGCAAGCCA TACCGTGAAA AGGACATCCA TTTGGCGCAG GACATCATCC GCGAACTGGA ACTCCTTGCG CAGGACAAAC AACTGTTTTC ATTGAGAATC GGGCACGCTG CGGGCCCGGA TAATCAGGAC TCGCTCAACT TCCTCCCGGG CTTCGACCGG ACGATGCTGA GGGCTCTCGT TGAACGTGCA GGCGGAAATG ACGATCCTGA CAATCTTTTC AATGCTTTCA GGGAAATATT TTATGAACTG CTCGATCCGC TGCCCCAGAC AGGAAAAACA CCGGAAGGCA AACCACTCTT CAGTATCCTT CACTCTCCTC TTCCGGAAAG CGAAATCTGC TCATCGATGC TCGAAGGGCT GAGCCGGTAC AGCTCTGCAA TGTGGGGCTG GCTCCACACC GCGGAGGCAC TTGGTGGTCT GGAAACGACA TTACGTCAGC AGCTGCGTAA AATCGAAAAA GAGCTGCTGG TGTACGATCC TGAAACGCTT GCAAAAAATG CCAGCGAGTA TGAAACCAGA GGCCATCTGC TCATGGGAGC ACTCTATCTT GAACGCACGT CTCCGGACAG TATAATCGTT CCCGACCTCT TCAATCCGGG TAGGCCGGAT ATCACCATCA CTCTCAAACC GAACCTCTCG CTCAGCGACA ACGCGTCGGA GTATTTCAGA AAAGCCTCGA AAACAAGAGG CAAATCCTCA GCCCTGGCGC AGCGCAGAAC CGGGCTCGAG CAGCGAAAAG CGATACTCGA ATCACTTTCG GCAGAACTCG CTTCGCTCGT TTCGCCGAAA GCTGTAAAAC AGTTCATCGA TGCCAACCGG ACGAAGTTTC GGGGAACCGG CATGCCGGCG GTTAAAACAG CTTCCGGACC CTCCTCCCGT TTCAGAACCG TTAAACTTTC GCCCTCGGTT ACGCTCTATA TCGGCAAAAA TGCAAAAAAC AACGAACAGC TTACCTTCGC ATTTGCCAAA CCCGACGATA TCTGGCTCCA TGCGAGGGGC AGCGCAGGAT CACACTGTGT GCTGAAAGGA GCAACCATGC AGCATAAAGA GGAGATCCGC AAAGCTGCTG AAATCGCCGC CCGTCATTCG GCGGCACAAC ACTCCGAACT GGTGCCGGTC ATGTACACAT TTAAAAAATA TGTCCGGCAT TCAAAAAAAC TCCCGGTCGG ACAGGTTATC GTTGAACGTG AAGAGGTGAT CATGGTTCGA CCGGCTAAAA ACGATGAATG A
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Protein sequence | MQRNYFTLYH TAMELHERLA GGFVFEIHSQ QKNELTLSFV TAAGDHLQVV MVSRKPELCL FTREGMNRRK RQSANLLHTI CEREVTGVAM SPYDREILVG LSGGDTLVLR LFSASANAFL VSEGIITDAC TSRNDLIGKP YREKDIHLAQ DIIRELELLA QDKQLFSLRI GHAAGPDNQD SLNFLPGFDR TMLRALVERA GGNDDPDNLF NAFREIFYEL LDPLPQTGKT PEGKPLFSIL HSPLPESEIC SSMLEGLSRY SSAMWGWLHT AEALGGLETT LRQQLRKIEK ELLVYDPETL AKNASEYETR GHLLMGALYL ERTSPDSIIV PDLFNPGRPD ITITLKPNLS LSDNASEYFR KASKTRGKSS ALAQRRTGLE QRKAILESLS AELASLVSPK AVKQFIDANR TKFRGTGMPA VKTASGPSSR FRTVKLSPSV TLYIGKNAKN NEQLTFAFAK PDDIWLHARG SAGSHCVLKG ATMQHKEEIR KAAEIAARHS AAQHSELVPV MYTFKKYVRH SKKLPVGQVI VEREEVIMVR PAKNDE
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