Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0811 |
Symbol | |
ID | 6353881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 888723 |
End bp | 891086 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642668435 |
Product | Kojibiose phosphorylase |
Protein accession | YP_001942870 |
Protein GI | 189346341 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.427192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACCGAA CTGAATCGAA CGGGTTTGCC GGCACGGGAC TGTCGCACGC CTCACTTCTT GGGCTTTCCG CAGATGCGTG GCTCATGCGG CGCAAAGGGT TCCGAAGAAC CGCAAACAGT ATCCAGATCG CCGAATCGCT CTTTACGATA GGCAATGGAT ATCTCAACAT CAGGGGAAGT CTTGAAGAGC TTCCTGACGG TCATTCCGGA GGAATGTATC TCGGCGGCGT TTATGACCGG TCGGAAGCCG ATGTCGAAGA GCTGGTGAAG TGTCCTATGT GGACCGATGT TTCCGTCTGG AGCGAAAGCG AGAAGTTCAG CCTGTCAACC TGCACCCTGC TGTTTCACGA GCAGGTGCTC GACATGAAAA AAGGGATTCT GCACCGTTCG ACCACCATGC GGAACTCCAC CGGCAGAATT CTTACCATAG AGAGCCTCCG TCTGGTAAAC ATGCATCACG TTCATTTTGG TTATATGCTT TTCAGGATAA CCCCGAGAAA TTTTTCAGCT CCCCTGCGTG TATTCAGCGG TCTTAACGGA GATGTATGCA ACCGTGGTTT TTTCCCCGAA GAGCGCATCA AGCACCTGCA GCTTGAAAAG ATCGAGCGGG GCCGGAATTT CATGTACCTC GAAATGAAAA CCCGGCAGCA GGGTATACGG ATAGCTGAGG CCGCTTCGTG GAAGCTGATA CTGCCCAAAT CCGCACGGGC AAATCCCGAA CCGAGAATTT ACGGCGAGAA ATTCACCAGC GAGATGACCC TCGACGTCGA GAAGGGCCAG TCCTATACGT TCGAAAAACT TGCCGTGGTG CATACCAGCC GGGAAATACC CGAAGAGAGC ATGTTCAGCC GCTCGATATG CGAGCTGAAA AAATATGTCC GTATAGGAGC CGATGTCCAT CTTGCTTCTC ATCTTCAGGC ATGGGGGGAG AAATGGAAGC AGGCCGACAT CCGGATATCG GGAGACCCTC ATGCCCAGGG GGCGTTGCGT TACAACATCT ACCAGTTGCT GATCAATGGA CCTCCGGTTT CAGGCAGCAT CGGAGCGAAG TTCCTCAGTT CGGAGGGTTA CCTCGGCCAT GTGTTCTGGG ATACCGAGAT TTTCATTCTG CCTTTCTTTA TCTACAATTT TCCGGAAATA GCGCGCAACA TGCTGCACTA CCGGTTTGCG ACGCTGCCGG GTGCGAAGAG AAACGCAGAA AGGAACGGCT ACCGGGGAGC GAAATATGCA TGGGAGTCCG CATCCACAGG TGAGGACGTG ACTCCGAGAT TTGCTTCGAA ACTTGAGCGC ACCATTCGGC TTATCTATAC CGGTATAGAG GAGGATCATA TCGTTTCGGA TGTCATATAT GGCCTCGAGA GATATTTCCG GGTAACCGGT GACGAGGAGT TTCTTTTTGA GTGCGGGCTT GAAATGGTTT TTCAGACGGC AAGATTCTGG GCAAGCCGGG TGGTATTCAG CGAGGGAATC TATGAGATAC GCCGGGTTAT CGGCCCCGAC GAATTTCATG AACATGTCGA CAATAACGCC TATACGAACT ACATGGTGAA ATGGCATCTT CGGCTTGCCT GCATGCTTTT TACCTACATG ACGAAACGAC ACCTCGACCG GTTCGAGCCT CTTTGCCGCA AAATTGAACT TGTCGAAGAA GAGGTTGCCG AGTGGCTTTC GGTGAGCAGG TCTCTGAAAT TTTCCATCGA TCCCGAGACC ATGCTTGTTG AGCAGTTCGA CGGTTATTTC AGGCTCCGCG ACTACGTTAT CGAAGGGTTC GACCGTAAAG GGCACCCGAA GCTGCCCAGA GGAGTCACCT ACAGGAATAT CGGATCGACG ACGCTCATCA AGCAGGCCGA CGTGCTGCTG CTGATGCACC TGTTTCCCCA TGCGTTCAGC CAGGATGCAA AGCAGGCGAA TTATGATTAC TACGAAAAGC GTACCGCGCA CAAGTCATCC TTAAGTCACT GTACGCATGC AATGATGGGT CTGTCGGTCG GAAAACGATC CAGAGCTTAC CACTACTTTA TGAAAACCGC TCTTTTCGAT CTTGAAAATC TACACGGAAA TACAGCCATG GGCATTCATG CCGCTGCGGT AGGCGGCGCC TGGCAGACCG TCGTATACGG GTTCGGAGGG CTGTCGATAA AATCGGACCG GCTGGTGCTG AAGCCCTGGC TGCCGGGGAA GTGGACGTGT CTCTCTTTTT CCGTTCGGTG GCAGGATCGG AGTATTGACC TTGCTATCTA TCACGACAGG ATTTCCATAT GTATAGCGGC TCCCTATGAC GGAGAAATTC CGGTGAGTCT CTATCATAAA ACGCATAAAA TCAGGACAAA CAGGAAAGAG GTGCTGCACT ATTGTTCATC GTGA
|
Protein sequence | MYRTESNGFA GTGLSHASLL GLSADAWLMR RKGFRRTANS IQIAESLFTI GNGYLNIRGS LEELPDGHSG GMYLGGVYDR SEADVEELVK CPMWTDVSVW SESEKFSLST CTLLFHEQVL DMKKGILHRS TTMRNSTGRI LTIESLRLVN MHHVHFGYML FRITPRNFSA PLRVFSGLNG DVCNRGFFPE ERIKHLQLEK IERGRNFMYL EMKTRQQGIR IAEAASWKLI LPKSARANPE PRIYGEKFTS EMTLDVEKGQ SYTFEKLAVV HTSREIPEES MFSRSICELK KYVRIGADVH LASHLQAWGE KWKQADIRIS GDPHAQGALR YNIYQLLING PPVSGSIGAK FLSSEGYLGH VFWDTEIFIL PFFIYNFPEI ARNMLHYRFA TLPGAKRNAE RNGYRGAKYA WESASTGEDV TPRFASKLER TIRLIYTGIE EDHIVSDVIY GLERYFRVTG DEEFLFECGL EMVFQTARFW ASRVVFSEGI YEIRRVIGPD EFHEHVDNNA YTNYMVKWHL RLACMLFTYM TKRHLDRFEP LCRKIELVEE EVAEWLSVSR SLKFSIDPET MLVEQFDGYF RLRDYVIEGF DRKGHPKLPR GVTYRNIGST TLIKQADVLL LMHLFPHAFS QDAKQANYDY YEKRTAHKSS LSHCTHAMMG LSVGKRSRAY HYFMKTALFD LENLHGNTAM GIHAAAVGGA WQTVVYGFGG LSIKSDRLVL KPWLPGKWTC LSFSVRWQDR SIDLAIYHDR ISICIAAPYD GEIPVSLYHK THKIRTNRKE VLHYCSS
|
| |