Gene Clim_0808 details

Gene Information

• Locus tag: Clim_0808
• ID: 6353878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 883783
• End bp: 885618
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642668432
• Product: biotin/lipoyl attachment domain-containing protein
• Protein accession: YP_001942867
• Protein GI: 189346338
• COG category: [C] Energy production and conversion
• COG ID: [COG1038] Pyruvate carboxylase; [COG5016] Pyruvate/oxaloacetate carboxyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.443377
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTCGGTTTAT GGATGTTTCC TTCCGTGACG GTTTCCAGTC CTGTTACGGA 
GCGAGGGTGA AAACTGCGGA TTTCATTCCC GCGCTCGAAG CTGCAGTGCA GGCGGGTACC 
GATAATTTTG AAATCGGCGG CGGTGCGCGT TTTCAGAGTC TGTACTTCTA CTGCCAGGAG 
GATGCATTCG ACATGATGGA TGCCGCCAGA CGGATCGTAG GGCCGGATAT CAATCTGCAG 
ACCCTGTCGA GGGGCGCCAA CGTGGTCGGC CTGGTATCAC AGTCGCGCGA CATCATCGAC 
CTGCATGCCC GAATGTTCAA GAAGCATGGT ATAACCACCA TCCGCAATTT CGATGCGCTC 
ATGGATGTGC GCAACATCGC CTACTCCGGC CAGTGCATCC ACAACGCCGG TCTGAAGCAT 
CAGGTGGTGA TCGCCCTGAT GGGACTTCCT CCGGGGCTGA AGGAGACCTA CTGCCACACC 
CCGCAGTTCT ATCTCGACAA GCTCCGCGAG ATTCTCGATG CCGGCATTCC TTTCGACAGC 
GTGGCCTTCA AGGACGCATC GGGAGCCACA ACGCCCGTTG TCGTTTACGA GTCGATCAAG 
GGCGCACGTA AAATGCTGCC CGAAGGCACC GTTATCGAGT TCCACACGCA CGATACTGCC 
GGTATGGGCG TCGCCTGCAA CTACGCGGCC ATCGAGGGCG GAGCGGACAT CATCGATCTT 
GCCATGGCTC CGGTCAGCGG TGGTACGGCC GAGGTCGATA TCCTCACCAT GTGGCACAGG 
CTTCGAGGCA CCGATTATAC GCTCGACATC GATCATGAGA AGTATATAGA GGTTGAGGGT 
CTTTTCATGA ACCAGATGGA GAAGTACTAC ATGCCTCCCG AAGCCAAGGA GGTGAACCCG 
CTCATACCGT TCTCTCCGAT GCCGGGTGGA GCCCTGACCG CCAATACCCA GATGATGCGC 
GACACCAATA CGCTCCATCT CTTTCCCGAA GTGATCCGCA ATATGCGCGA AGTGGTCGCC 
AAAGGCGGTT TCGGTTCATC AGTGACTCCG GTTTCGCAGT TCTACTTCCA GCAGGCTTTC 
GCCAACACGG TTCAGGGGCC CTGGAAAAAG ATCACCGAAA GCTACGGCAA AATGGTGCTT 
GGCTATTTCG GACGCACTCC GGCTGAGCCT GATCCGGAAG TGGTGCGCCT CGCCTCCGAG 
CAGCTCGGCC TGCAGCCCAC CACCGAGGAC GTGCACGACA TCAACGACCG CAATCCCGAA 
CTCGGTATTG CTTTCAATCG TGGGCTTCTT GAAAAAGCGG GCCTGCCGAC AACCGAGGAG 
AACATCTTTA TTTCAGCTAC CTGCGGCGCC AAAGGCATCT CTTTCCTCAA GGGCGACAAG 
CCGCTCGGCA TCCGCTTCAA GGCCGACGTC GAGGCTGAAG CCGCCGCCAA GGCCGCTCCC 
AAAAACGTTT CTTCACCAAC CGTATCAACA GCTAAACCAG CAAAATCAGG CATGTCAAAC 
TATATCATTA CCGTGGACGG CAAGTCCTAC AATGTTTCGG TAGCAGAAGG CACCGGCGCA 
GTAAAATCCG CCGCTCCGAC AGTTCCTGCC GCAGCGACGT CCCAGGCTCA GGCCGCAGGC 
GAGGGTACTC CGGTCGAAAC CTCTTTGCCG GGCACCGTGA TGGCCATCGA AGTGGAAGTT 
GGAGACATGG TCAGGGAGGG CGATGATGTG GTGATCATCG AGGCTATGAA GATGGAGTCG 
CCGGTCAAGG CGCCCAAAAG CGGCAAGGTG GTTTCGATCG ATGTCGCCGT CGGTGATACC 
GTAGCCACCG GTGATGCATT GCTTTATATC GCATGA 

 

Protein sequence

MKKIRFMDVS FRDGFQSCYG ARVKTADFIP ALEAAVQAGT DNFEIGGGAR FQSLYFYCQE 
DAFDMMDAAR RIVGPDINLQ TLSRGANVVG LVSQSRDIID LHARMFKKHG ITTIRNFDAL 
MDVRNIAYSG QCIHNAGLKH QVVIALMGLP PGLKETYCHT PQFYLDKLRE ILDAGIPFDS 
VAFKDASGAT TPVVVYESIK GARKMLPEGT VIEFHTHDTA GMGVACNYAA IEGGADIIDL 
AMAPVSGGTA EVDILTMWHR LRGTDYTLDI DHEKYIEVEG LFMNQMEKYY MPPEAKEVNP 
LIPFSPMPGG ALTANTQMMR DTNTLHLFPE VIRNMREVVA KGGFGSSVTP VSQFYFQQAF 
ANTVQGPWKK ITESYGKMVL GYFGRTPAEP DPEVVRLASE QLGLQPTTED VHDINDRNPE 
LGIAFNRGLL EKAGLPTTEE NIFISATCGA KGISFLKGDK PLGIRFKADV EAEAAAKAAP 
KNVSSPTVST AKPAKSGMSN YIITVDGKSY NVSVAEGTGA VKSAAPTVPA AATSQAQAAG 
EGTPVETSLP GTVMAIEVEV GDMVREGDDV VIIEAMKMES PVKAPKSGKV VSIDVAVGDT 
VATGDALLYI A