Gene Clim_0796 details

Gene Information

• Locus tag: Clim_0796
• ID: 6353866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 871558
• End bp: 872085
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642668420
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
• Protein accession: YP_001942855
• Protein GI: 189346326
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAC TCTGCAGTGA TGAACTCAGG CTGCGTGCAA GCAGAATCAA ACTGGTTATT 
TCCGACAATG ATGGCGTTTT TACCGATAAC GGGGTGTATT ACGGTGCAGC GGGGGAGGAA 
CTGAAGCGCT ACTCTATTCG TGACGGCATG GGTGTGGAGC GGCTCCTTGA ATTTGGTATC 
GATACGGCAA TAATGACCGG AGAGGTTTCT CCCAGTATTG CCAAACGTGC GGAAAAGCTG 
AAGATGCGGT ATCTCTACCT TGGAGTGAAG GATAAACGTT CACGACTTCA GACGGTTCTT 
TCCGATACAG GCATGGAGAT GCATGAGCTT GCCTATATCG GTGATGATGT CAATGATCTT 
GCAATCATGA AAGCCGTTGC AGATCACGGG CTCACTGCCT GCCCTGGTGA TGCCATGCAT 
TTCGTCAAGC CTTTTGTTCA TTATATCTGT AAAGCCAGAG GCGGTGACGG AGCGTTCAGG 
GACTTTGCCG AATGGCTGAT AGCTAAAAAA AATACATCAG ATGACTGA 

 

Protein sequence

MIELCSDELR LRASRIKLVI SDNDGVFTDN GVYYGAAGEE LKRYSIRDGM GVERLLEFGI 
DTAIMTGEVS PSIAKRAEKL KMRYLYLGVK DKRSRLQTVL SDTGMEMHEL AYIGDDVNDL 
AIMKAVADHG LTACPGDAMH FVKPFVHYIC KARGGDGAFR DFAEWLIAKK NTSDD